Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03693 ATGCTACTTCAGGCTCTTCTTGACTATGAAAGGCATAAAACTAAAGGTAGTGAGCTGAATGTGCCTATTACTTCTCATGCAGAGCCAATGAATATTGAAAATCAGTGTGTCCAAGGTTCAGCATCATCAGGTAGGGCACGGAGAGATGCTGCGGCTAGGGCTATGCAGGGTTGGCATTCACAACGTCTCCTGGGAAATGGTGAAGTTAGTGATCCTATTATTAAGGATAAGAACTCTCTGTCTATGCAAAAGCGTGAAAAGCAGATTAGAAACATCAATGTACTTAAACGCAAGAAATCATCAGACATGGTGAATGCAGTCAAAATTGCTCACAGTAAACCATCTAAACCACAATTGGACACATCTGTGGTAGACATTGGACCTCCTGCAGATTGGGTAAAAATCAATGTGCAAAAAACTAAAGATTGTTTTGAGGTCTATGCTTTGGTTCCTGGCCTTCTGCGGGAAGAGGTGCGTGTTCAATCAGACCCAGCTGGACGCTTGGTCATAAGCGGTGAGCCTGTGCATTCTGACAATCCATGGGGGGTGACACCTTTCAAGAAGGTTGTCAGTTTGCCTTCAAGAATTGATACTCATCAGACATCTGCTGTGGTGACTTTGCATGGACAACTGTTTGTTCGAGTTCCATTTGAGCAATCCGAATAG 666 0.4369 MLLQALLDYERHKTKGSELNVPITSHAEPMNIENQCVQGSASSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSMQKREKQIRNINVLKRKKSSDMVNAVKIAHSKPSKPQLDTSVVDIGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPVHSDNPWGVTPFKKVVSLPSRIDTHQTSAVVTLHGQLFVRVPFEQSE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03693 221 SUPERFAMILY HSP20-like chaperones 130 217 IPR008978 -
Spst3g03693 221 FunFam AT-rich interactive domain-containing protein 3 113 221 - -
Spst3g03693 221 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 4 220 IPR045147 GO:0006357
Spst3g03693 221 Pfam Hsp20/alpha crystallin family 138 220 IPR002068 -
Spst3g03693 221 CDD ACD_sHsps-like 136 216 - -
Spst3g03693 221 Gene3D - 80 221 IPR008978 -
Spst3g03693 221 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 121 221 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03693 Spst-Chr3 86937320 86940223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03693 4 219 ARID Transcription Factor Family AT1G76510 60.369 1.17e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03693 - - gmx:100785730 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03692 3 86933259 86935817 Spst3g03693 3 86937320 86940223 PCT