Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03689 ATGCAGAGTGAAACTGCAGCCATAATTGGTCCCCACTACTCAGTAACTGCACATGTGATTTCACACATAGCAAATGAGATGCAAGTGCCCCTACTTTCATTGGCAACAGACCCTACACTGACTTCACTGCAGTTTCCATATTTTGTTAGGACAACACAGAGTGATATGTACCAGATGGCTGTTGTGGCAGAAATTGTTGATCACTTTCAATGGAGAGATGTCATAGCCATTTACGCTGATGATGATCATGGAAGAAGTGGTATAGCAGCCTTAGGGGATAGGCTAGCAGAGAAACGTTGCAAAATATCATATAAAGTACCCTTTAGGCCAGATAATATAACCCGGGAAGAAATAAATAGTGCATTAGTTAAGGTAGCTTTAATGGAGTCTAGGGTAATAGTCATTCACTTATACACTTCTTCTGGTCTAGAAGTACTTCATCATGCGGCTGGGTCTCTTGGCATGATGAGAAGTGGTTATGTGTGGATAGCCACAGATTGGCTTTCTACAGTACTAGATTCAGACCCATCCTTGTCAACATCTCCAGCCATGAATGACATCCAAGGTGTCATCACCTTGCGCATGCATACCCCAGAATCAGATATCAAAAGAAAATTTATTTCTAGGTGGAACAAACTGAGCCGAACAGATGATCCTAATCAGAACTTTTTTGGGTTAAATGTCGTTGGTCTTTACGCCTATGACACGGTTTGGGTGCTTGCGTCTGCACTCGATTCATTTTTTAAGATGGGGGAACTTTGTCATTTTCAAATGATTCAAGTCCAAACATGTCAAGAGGGGGCACCCTTAATCTTGATACCATGGGGGTCTTTGTTTATGGTGACATATTGCGTCAAAAAATTGTAG 867 0.4164 MQSETAAIIGPHYSVTAHVISHIANEMQVPLLSLATDPTLTSLQFPYFVRTTQSDMYQMAVVAEIVDHFQWRDVIAIYADDDHGRSGIAALGDRLAEKRCKISYKVPFRPDNITREEINSALVKVALMESRVIVIHLYTSSGLEVLHHAAGSLGMMRSGYVWIATDWLSTVLDSDPSLSTSPAMNDIQGVITLRMHTPESDIKRKFISRWNKLSRTDDPNQNFFGLNVVGLYAYDTVWVLASALDSFFKMGELCHFQMIQVQTCQEGAPLILIPWGSLFMVTYCVKKL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03689 288 Pfam Receptor family ligand binding region 4 248 IPR001828 -
Spst3g03689 288 SUPERFAMILY Periplasmic binding protein-like I 4 248 IPR028082 -
Spst3g03689 288 FunFam Glutamate receptor 54 215 - -
Spst3g03689 288 Gene3D - 61 224 - -
Spst3g03689 288 PRINTS Metabotropic glutamate GPCR signature 58 74 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst3g03689 288 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst3g03689 288 PRINTS Metabotropic glutamate GPCR signature 39 58 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst3g03689 288 PRINTS Metabotropic glutamate GPCR signature 74 91 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst3g03689 288 PANTHER OS06G0188250 PROTEIN 3 247 - -
Spst3g03689 288 Gene3D - 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03689 Spst-Chr3 86908043 86908909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03689 1 256 Ion Channels AT3G51480 55.253 2.59e-92 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03689 K05387 - gmx:100789442 425.246