Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst3g03667 | ATGGTATATTGTTTGGACAGTGATAAACAGGACCTACCAGTACTATACTGGTTTGGGGAAAATATAAGAGAGAAATTAAAAAGAAGGATTTTGGATTATGCAGCAGTGTTTGTTGTGGGCAAAGGGAGTAATGCATTAGAGCGTGGTATCTGTGTCCATATGGCTGCCTTCATGGGTAGTAGTGACATGGACAAAACCCCAAAAGAGAAGGAGTCTAAGACACCTCCAGCTACATCACAGGAGCAGTCTCCGACAACTGGCTTGGCGACTATTAATCCTGACTGGTCTAACTTTCAGACATATTCTCCTATACCTCCACATGGTTTCTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATAATGCCTCCCTATGGCACCCCACCACATCCCTATGTAGCAATGTATCCCCATGGTGGGATTTATGCCCATCCATCCATTCCTCCGGGATCTTATCCTTTCAGTCCTTTTGCCATGGCTTCTCCAAATGGTATTGCAGATACTTCTGGAAATACCCCAGGAAGCATTGAAGTTGGTGCTAAACCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTGCCAGTGGGGGTAGTTTGAATATGTGGATTACAGGAAAAAATAATGAACTTGGTAAAACACCAGGAGAATCTGCTAATGGGATTCATTCCAAAAGTGGTGAGAGTGCAAGTGACGGAACTAGTGAAGGAAGTGACGAGAATTCCCATAATGACTCGCAATTGAAATCCGGGGAGAGACAGGACTCTTTTGAAGATGAACCATCTCAAAATGGAAGTTCGGTACATGCTCCTCAAAATGGTGTACATATTCGACCTCAGACACTAGTTAACCAAACTATGCCTATCATACCCATGTCTACTGCAAGTGCTCCTGGAGCAGTTCCTGGTCCCACTACTAATTTAAATATAGGAATGGATTATTGGGGCACACCAACTTCATCCACCATTCCTGCACTGCATGGAAAGGTTTCTTCCGCTGCAGTTGCTGGAGGGATGATTACTGCTGGGTCACGAGATGGTGTTCAGTCACAAATTTGGCTCCAGGACGAAAGAGAACTTAAAAGACAAAGGCGGAAGCAGTCTAATAGAGAATCTGCACGCAGATCCAGGTTACGGAAGCAGGCCGAATGTGATGAACTAGCCCAGCGTGCTGATGCTTTGAAAGAAGAAAATGCCACTCTCCGAACCGAAGTGAGCAGGATCAGGAGTAACTACGAGCAGCTACTTTCTGAGAATGCCTCCCTCAAGGAGAGACTTGGGGAGATACCTGGTGTTGCTACACCTGGGAACGAGGATGTTAGGTCTGGCCAAAATGATCAGCATGTTAGTAATGACACTCAACAAAGTGATCAAAAAGAGACTGTGCAGGGTGTTCATTAG | 1425 | 0.4526 | MVYCLDSDKQDLPVLYWFGENIREKLKRRILDYAAVFVVGKGSNALERGICVHMAAFMGSSDMDKTPKEKESKTPPATSQEQSPTTGLATINPDWSNFQTYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMASPNGIADTSGNTPGSIEVGAKPPEVKEKLPIKRSKGSASGGSLNMWITGKNNELGKTPGESANGIHSKSGESASDGTSEGSDENSHNDSQLKSGERQDSFEDEPSQNGSSVHAPQNGVHIRPQTLVNQTMPIIPMSTASAPGAVPGPTTNLNIGMDYWGTPTSSTIPALHGKVSSAAVAGGMITAGSRDGVQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENATLRTEVSRIRSNYEQLLSENASLKERLGEIPGVATPGNEDVRSGQNDQHVSNDTQQSDQKETVQGVH | 474 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst3g03667 | 474 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 367 | 430 | IPR004827 | GO:0003700|GO:0006355 | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 268 | 283 | - | - | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 246 | 267 | - | - | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 446 | 474 | - | - | |
Spst3g03667 | 474 | CDD | bZIP_plant_GBF1 | 370 | 420 | IPR045314 | GO:0003700|GO:0006355 | |
Spst3g03667 | 474 | Pfam | Disordered region downstream of MFMR | 192 | 332 | - | - | |
Spst3g03667 | 474 | Gene3D | - | 368 | 423 | - | - | |
Spst3g03667 | 474 | SUPERFAMILY | Leucine zipper domain | 368 | 424 | IPR046347 | GO:0003700|GO:0006355 | |
Spst3g03667 | 474 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 372 | 387 | IPR004827 | GO:0003700|GO:0006355 | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 431 | 474 | - | - | |
Spst3g03667 | 474 | Pfam | bZIP transcription factor | 365 | 427 | IPR004827 | GO:0003700|GO:0006355 | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 367 | 390 | - | - | |
Spst3g03667 | 474 | Coils | Coil | 385 | 433 | - | - | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 76 | 92 | - | - | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 202 | 245 | - | - | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 62 | 92 | - | - | |
Spst3g03667 | 474 | Pfam | G-box binding protein MFMR | 58 | 153 | IPR012900 | - | |
Spst3g03667 | 474 | MobiDBLite | consensus disorder prediction | 171 | 283 | - | - | |
Spst3g03667 | 474 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 58 | 465 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Spst3g03667 | 474 | SMART | brlzneu | 365 | 429 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst3g03667 | Spst-Chr3 | 86726542 | 86735135 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst3g03667 | 58 | 438 | bZIP Transcription Factor Family | AT2G35530 | 63.496 | 2.20e-159 | 456 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Spst3g03667 | MFMR_assoc | 1.1e-57 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst3g03667 | K09060 | - | gmx:100101912 | 772.311 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst2g01197 | 2 | 10575491 | 10589646 | Spst3g03667 | 3 | 86726542 | 86735135 | PCT |