Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03667 ATGGTATATTGTTTGGACAGTGATAAACAGGACCTACCAGTACTATACTGGTTTGGGGAAAATATAAGAGAGAAATTAAAAAGAAGGATTTTGGATTATGCAGCAGTGTTTGTTGTGGGCAAAGGGAGTAATGCATTAGAGCGTGGTATCTGTGTCCATATGGCTGCCTTCATGGGTAGTAGTGACATGGACAAAACCCCAAAAGAGAAGGAGTCTAAGACACCTCCAGCTACATCACAGGAGCAGTCTCCGACAACTGGCTTGGCGACTATTAATCCTGACTGGTCTAACTTTCAGACATATTCTCCTATACCTCCACATGGTTTCTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATAATGCCTCCCTATGGCACCCCACCACATCCCTATGTAGCAATGTATCCCCATGGTGGGATTTATGCCCATCCATCCATTCCTCCGGGATCTTATCCTTTCAGTCCTTTTGCCATGGCTTCTCCAAATGGTATTGCAGATACTTCTGGAAATACCCCAGGAAGCATTGAAGTTGGTGCTAAACCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTGCCAGTGGGGGTAGTTTGAATATGTGGATTACAGGAAAAAATAATGAACTTGGTAAAACACCAGGAGAATCTGCTAATGGGATTCATTCCAAAAGTGGTGAGAGTGCAAGTGACGGAACTAGTGAAGGAAGTGACGAGAATTCCCATAATGACTCGCAATTGAAATCCGGGGAGAGACAGGACTCTTTTGAAGATGAACCATCTCAAAATGGAAGTTCGGTACATGCTCCTCAAAATGGTGTACATATTCGACCTCAGACACTAGTTAACCAAACTATGCCTATCATACCCATGTCTACTGCAAGTGCTCCTGGAGCAGTTCCTGGTCCCACTACTAATTTAAATATAGGAATGGATTATTGGGGCACACCAACTTCATCCACCATTCCTGCACTGCATGGAAAGGTTTCTTCCGCTGCAGTTGCTGGAGGGATGATTACTGCTGGGTCACGAGATGGTGTTCAGTCACAAATTTGGCTCCAGGACGAAAGAGAACTTAAAAGACAAAGGCGGAAGCAGTCTAATAGAGAATCTGCACGCAGATCCAGGTTACGGAAGCAGGCCGAATGTGATGAACTAGCCCAGCGTGCTGATGCTTTGAAAGAAGAAAATGCCACTCTCCGAACCGAAGTGAGCAGGATCAGGAGTAACTACGAGCAGCTACTTTCTGAGAATGCCTCCCTCAAGGAGAGACTTGGGGAGATACCTGGTGTTGCTACACCTGGGAACGAGGATGTTAGGTCTGGCCAAAATGATCAGCATGTTAGTAATGACACTCAACAAAGTGATCAAAAAGAGACTGTGCAGGGTGTTCATTAG 1425 0.4526 MVYCLDSDKQDLPVLYWFGENIREKLKRRILDYAAVFVVGKGSNALERGICVHMAAFMGSSDMDKTPKEKESKTPPATSQEQSPTTGLATINPDWSNFQTYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMASPNGIADTSGNTPGSIEVGAKPPEVKEKLPIKRSKGSASGGSLNMWITGKNNELGKTPGESANGIHSKSGESASDGTSEGSDENSHNDSQLKSGERQDSFEDEPSQNGSSVHAPQNGVHIRPQTLVNQTMPIIPMSTASAPGAVPGPTTNLNIGMDYWGTPTSSTIPALHGKVSSAAVAGGMITAGSRDGVQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENATLRTEVSRIRSNYEQLLSENASLKERLGEIPGVATPGNEDVRSGQNDQHVSNDTQQSDQKETVQGVH 474
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03667 474 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 367 430 IPR004827 GO:0003700|GO:0006355
Spst3g03667 474 MobiDBLite consensus disorder prediction 268 283 - -
Spst3g03667 474 MobiDBLite consensus disorder prediction 246 267 - -
Spst3g03667 474 MobiDBLite consensus disorder prediction 446 474 - -
Spst3g03667 474 CDD bZIP_plant_GBF1 370 420 IPR045314 GO:0003700|GO:0006355
Spst3g03667 474 Pfam Disordered region downstream of MFMR 192 332 - -
Spst3g03667 474 Gene3D - 368 423 - -
Spst3g03667 474 SUPERFAMILY Leucine zipper domain 368 424 IPR046347 GO:0003700|GO:0006355
Spst3g03667 474 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 372 387 IPR004827 GO:0003700|GO:0006355
Spst3g03667 474 MobiDBLite consensus disorder prediction 431 474 - -
Spst3g03667 474 Pfam bZIP transcription factor 365 427 IPR004827 GO:0003700|GO:0006355
Spst3g03667 474 MobiDBLite consensus disorder prediction 367 390 - -
Spst3g03667 474 Coils Coil 385 433 - -
Spst3g03667 474 MobiDBLite consensus disorder prediction 76 92 - -
Spst3g03667 474 MobiDBLite consensus disorder prediction 202 245 - -
Spst3g03667 474 MobiDBLite consensus disorder prediction 62 92 - -
Spst3g03667 474 Pfam G-box binding protein MFMR 58 153 IPR012900 -
Spst3g03667 474 MobiDBLite consensus disorder prediction 171 283 - -
Spst3g03667 474 PANTHER G-BOX-BINDING FACTOR 3-RELATED 58 465 IPR044827 GO:0003700|GO:0006355|GO:0043565
Spst3g03667 474 SMART brlzneu 365 429 IPR004827 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst3g03667 Spst-Chr3 86726542 86735135 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03667 58 438 bZIP Transcription Factor Family AT2G35530 63.496 2.20e-159 456
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst3g03667 MFMR_assoc 1.1e-57 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03667 K09060 - gmx:100101912 772.311
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01197 2 10575491 10589646 Spst3g03667 3 86726542 86735135 PCT