Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03656 ATGCAGGTTGAGGTGAGCAAGTACACTGAAGGCGTGAATGAAAAGGCATTACGACCAAATGGATTACCCAAGTCATTAATTCGTTATGATGCTCGTCAAAAGGAGAAAGCTTTGGGTTCCATCACTGAGGTTGTCCAAACTGTTAGGGACCCAAAATCCATTATTAGTGATAGGAATGGTGATACTTCCTCCAAGCAAGAAGAGAAAGAGAAAATCAACTTTGATTTTGTATTGCCAAAGTCTGCTGATACTGGGAATACAAGCACACCTGGTAGACAACCTTCTCCACTTAACGTCCATCGCATGAGTTCTAGTCAGGATAAGAGCAGGACATCACAATCAGGACGGACTGCATTCAAGGGTTTTAAAGGAAAATCTCTGAGTGCTGCAGGGAGAGATGAAGAGAAGGCCATTGTTGAACCTGAGGTTTTGATGACCAAGGAAATAGATTGGTCTAACAATTGGGAGCACTCACTAAGAGAGAGGGACATAAGGCAGGGAATTGATCTAGCAACCACATTGGAGAGGATAGAAAAGAACTTCGTGATTTCTGATCCTCGACTGCCAGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACGGAGTATACACGAGAAGAAATTTTGGGACGAAATTGTCGGTTTCTTCAAGGACCAGAAACAGATCAGGCAACTGTTAACAAGATAAGGGATGCTATAAGAGAACAGAGGGAAATCACTGGTGAACTTCAATACTTCATTGGTGTTCAACTAGATGGAAGTGATCATATAGAACCCTTAAAAAACCGACTGTCAGAGACAGCTGAGCAACAGAGTGCAAAGTTGGTGAAAGCCACTGCAGAAAATGTTGATGAAGCTGTCCGAGAACTTCCCGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCAACCTGTCTTTCCACGACCTCACAAAAAGGAAAATCCTTCTTGGATAGCAATACAAAAGTTAGCTGAAAAGGCAAACGTAGGATCTTCAGAACTGTCTCCTGTAGTATACTTCTTACCTGAAGAAGTTGAACATTGGAATACAACTTGTGAGAAAGAGAATCACCAGCCAAAGCATTACAATTTGGCAAAAGCATTATTGGCACAAAATGGGAGGAAGAATGATGGTGTGAGGTGCATTTCCGCGACAAATGAGCAACCTTCCTCTGTCACAACACGACCCACGACCGTGCCGTGGGAAGGGAGTGAGACTGCCGGTGTGGAGATAAGAGAAACTAAAATGAGTGTGCTTAATGAAAGAAGCAGCCATTTATCTGGTTCTTGTCCTCACCATTTGTGTTGTATTGTAGCTGCAAGAGGCGAAAAAATTGGCCTCCAACATTTTGTGCCCATAAGGCCACTAGGTTGTGGTGATACTGGCAGTGTTCATTTGGTGGAACTCAAAGGTACTGGTGAACTATATGCAATGAAAGCAATGGAAAAGTCTATCATGCTAAATCGTAATAAGGTTCACCGGTCATGCATTGAGAGAGAGATTATATCATTATTGGATCATCCTTTTCTTCCAGCACTATACACCTCATTTCAGACTTCTACACATGTATGTTTGATTACTGACTTCTGCCAAGGGGGAGAGTTGTTTGCATTGCTTGACAGACAACCGATGAAGATTTTCAAAGAAGAATCAGCAAGATTCTATGCGGCAGAGGTTGTCATTGGTTTGGAATATCTCCACTGTCTAGGTATAATTTATCGTGACTTAAAGCCTGAAAATATCTTAATTCAGAAGGATGGTCATGTTGTATTAACTGATTTTGATCTATCATTTATGACATCGTGTAAACCCCAGATTGTGAAGCAATCAGTGCCTGGTAAAAGGAGATCACGAAGTGAACCGCGACCAATAATTGTTGCAGAGCCAGCTACACAATCAAACTCATTTGTTGGAACTGAAGAATATATTGCCCCTGAAATTATAACTGGAGCTGGGCATAGTAGCGCCATAGATTGGTGGACCCTTGGTATCTTGTTGTATGAGATGCTCTATGGTCGTACACCATTTAGAGGAAAGAATAGACAGAAGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCAAGCAGCATCCCGGCTAGTCTTGCAGCCAGGCAATTGATTAATGCACTATTGCAAAGAGACCCAACAAGTCGTCTAGGTTCAACCACTGGTGCAAATGAAATCAAACAACATCCCTTTTTCCGTGGAATCAATTGGCCTCTTATCCGCAACATGACTCCACCGCCATTAGATGTTCCTCTAAAATTGATAGGAAAAGATCCAGTGGCAAAGAATATAAAGTGGGAAGATGATGGGTTGGATGGTGAGAACGAGAAAATGGAAAACAATTCAGAATAG 2382 0.4177 MQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKEKALGSITEVVQTVRDPKSIISDRNGDTSSKQEEKEKINFDFVLPKSADTGNTSTPGRQPSPLNVHRMSSSQDKSRTSQSGRTAFKGFKGKSLSAAGRDEEKAIVEPEVLMTKEIDWSNNWEHSLRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVNKIRDAIREQREITGELQYFIGVQLDGSDHIEPLKNRLSETAEQQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKENPSWIAIQKLAEKANVGSSELSPVVYFLPEEVEHWNTTCEKENHQPKHYNLAKALLAQNGRKNDGVRCISATNEQPSSVTTRPTTVPWEGSETAGVEIRETKMSVLNERSSHLSGSCPHHLCCIVAARGEKIGLQHFVPIRPLGCGDTGSVHLVELKGTGELYAMKAMEKSIMLNRNKVHRSCIEREIISLLDHPFLPALYTSFQTSTHVCLITDFCQGGELFALLDRQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILIQKDGHVVLTDFDLSFMTSCKPQIVKQSVPGKRRSRSEPRPIIVAEPATQSNSFVGTEEYIAPEIITGAGHSSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPTSRLGSTTGANEIKQHPFFRGINWPLIRNMTPPPLDVPLKLIGKDPVAKNIKWEDDGLDGENEKMENNSE 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03656 793 SUPERFAMILY Protein kinase-like (PK-like) 445 764 IPR011009 -
Spst3g03656 793 SUPERFAMILY PYP-like sensor domain (PAS domain) 185 248 IPR035965 -
Spst3g03656 793 MobiDBLite consensus disorder prediction 61 76 - -
Spst3g03656 793 ProSiteProfiles Protein kinase domain profile. 456 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03656 793 Pfam Protein kinase domain 459 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03656 793 Gene3D PAS domain 156 245 - -
Spst3g03656 793 Gene3D PAS domain 246 293 - -
Spst3g03656 793 ProSiteProfiles PAS repeat profile. 166 239 IPR000014 -
Spst3g03656 793 Pfam PAS domain 189 248 IPR000014 -
Spst3g03656 793 MobiDBLite consensus disorder prediction 80 118 - -
Spst3g03656 793 SMART serkin_6 456 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03656 793 CDD PAS 189 248 IPR000014 -
Spst3g03656 793 CDD STKc_phototropin_like 454 765 - -
Spst3g03656 793 Coils Coil 264 284 - -
Spst3g03656 793 MobiDBLite consensus disorder prediction 52 118 - -
Spst3g03656 793 ProSitePatterns Protein kinases ATP-binding region signature. 462 485 IPR017441 GO:0005524
Spst3g03656 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Spst3g03656 793 FunFam Putative LOV domain-containing protein 540 754 - -
Spst3g03656 793 Gene3D Transferase(Phosphotransferase) domain 1 540 757 - -
Spst3g03656 793 FunFam LOV domain-containing protein 455 539 - -
Spst3g03656 793 Gene3D Phosphorylase Kinase; domain 1 455 539 - -
Spst3g03656 793 PANTHER FLIPPASE KINASE 1-RELATED 235 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03656 Spst-Chr3 86580501 86603351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03656 444 781 AGC Kinase Gene Family AT5G58140 82.006 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst3g03656 Pkinase 2.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03656 K20715 - cit:102626333 827.394