Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03655 ATGGAGAAACTGAAAGTATCTGTTAAGCATGATTCTGATGGCAGCAGTGATCAGGCAGATTCATTTCCAATATTCCAATTGCGCGAGAGTGAAAATGTTGGACAGCAGAGGATCGGAAGAGAGGATGATGATACAAAAGCTGTGAGATTGGATGGGGGTTCGGCAATTGCCTCCACTAATTCTGCAAGCAACAAGTGGATGGCATTTGCTAGTAAACCTGGTTTTGCAACTGATGGCAACTCAGCAATAAAGGATAACAGTAAAACTAAAGACAATTACTTGAGGAATCATCTAAAAGAGAAGTCCTCGTCTGATCAACAAATTTTAACTGAAGCAACCATAGCTGAGAGAACTGCTGAATGGGGTCTTGTGGTGAACTCTGGGAACTTCAAAGTAATGGGAGGAGAAAATACTGGCGCCTCTTTCGATGGTGACAGAATTAGAAACTTGTCAGATAGATTTGGTGAATCAGCACGGACTTCTGGTGAGTCAAATTTTGGATCTGAGTCATCATCAGGGGTGTTCCCAAGGGTTTCACAAGAGTTGAAGGAAGCACTGGGGACGCTGCAACAGACATTTGTTGTCTCAGATGCAACCAAACCAGACTGCCCAATCATGTATGCCAGCAGTGGCTTTTTCACTATGACTGGCTACTCTTCAAAGGAGATTATTGGAAGGAATTGTCGATTTCTTCAGGGGCCTGAGACAGACAAGAATGAAGTGGAGAAAATTCGGGATGCAATTAAAAATGGGAGAAGTTATTGTGGCAGACTATTAAACTACAAGAAAGATGGAACTCCATTCTGGAATCTTCTCACTGTCACCCCCATCAAAGATGACCATGGCAATACTATCAAATTCATCGGGACACCTGTGGGAGGAGGTGTGCTAAAGATGTGA 900 0.4311 MEKLKVSVKHDSDGSSDQADSFPIFQLRESENVGQQRIGREDDDTKAVRLDGGSAIASTNSASNKWMAFASKPGFATDGNSAIKDNSKTKDNYLRNHLKEKSSSDQQILTEATIAERTAEWGLVVNSGNFKVMGGENTGASFDGDRIRNLSDRFGESARTSGESNFGSESSSGVFPRVSQELKEALGTLQQTFVVSDATKPDCPIMYASSGFFTMTGYSSKEIIGRNCRFLQGPETDKNEVEKIRDAIKNGRSYCGRLLNYKKDGTPFWNLLTVTPIKDDHGNTIKFIGTPVGGGVLKM 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03655 299 SUPERFAMILY PYP-like sensor domain (PAS domain) 199 290 IPR035965 -
Spst3g03655 299 Gene3D PAS domain 192 293 - -
Spst3g03655 299 FunFam Ptaureo1a lov2 domain 181 295 - -
Spst3g03655 299 CDD PAS 205 290 IPR000014 -
Spst3g03655 299 MobiDBLite consensus disorder prediction 1 16 - -
Spst3g03655 299 ProSiteProfiles PAS repeat profile. 178 251 IPR000014 -
Spst3g03655 299 NCBIfam PAS domain S-box protein 205 289 IPR000014 -
Spst3g03655 299 ProSiteProfiles PAC domain profile. 252 299 IPR000700 -
Spst3g03655 299 Pfam PAS domain 199 290 IPR000014 -
Spst3g03655 299 PANTHER PROTEIN TWIN LOV 1 76 289 - -
Spst3g03655 299 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03655 Spst-Chr3 86574924 86576341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03655 181 294 AGC Kinase Gene Family AT5G58140 48.246 6.17e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03655 K20715 - gmx:100820096 476.092