Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03644 ATGGAACCGAGTACCCCATTAGATAGTTCTTCCAATATGGACTCTTTCATGTTCGATTCATCATCACGTAGAAGTACCGTGTCCATTCACTCTAGGAGTTCTGGTGTTATCAACTCCACCAGGGAAGTGAGTTTTGGCCACTCAGGATCCAAGCCTGTGAGATATGGGTCAAAGGGTGCTGAGTCCGAGGCTCTCAGTATGTCTCAGAAAGAAATCAGTGATGAGGATGCAAGGTTAGTTTATGTTGATGATCCCGATAAGACAAATGATATGCTTGAATTTGCCGGGAATTCGATTCTTACTGGAAAGTACTCCATCTTCACCTTTCTTCCAAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTACTTCCTTGTAATTGCCATTCTTAATCAGCTCCCTCAGTTAGCTGTATTTGGGAGGGGTGTTTCCATTTTGCCGTTGGCTTTTGTGCTTCTGGTTACTGGCGTGAAGGATGCATTCGAGGACTGGAGGAGGCACAGGTCAGATAAAATTGAGAACAACAGGTTAGGATTGATTTTGGTTAATGGTCAGTTTCTCGAGAAGAAGTGGAAGCATATTAGAGTTGGGGAAGTTATTAAAATCAGAGCAAATGAAACCATTCCCTGTGATATTGTGTTGCTCTCAACCAGTGACCCCACTGGGGTTGCTTATGTGCAGACTCTTAATCTGGATGGAGAGTCTAATTTGAAGACTAGGTATGCAAAGCAAGAGACTCAATCTAAGTTGCCAGAAAAGGAGAAGTTAGATGTGTTGATTAAGTGTGAGAAACCCAATAGGAATATATACGGGTTTCAGGGTAATATAGAAGTTGATGGAAAGAGGTTGTCTCTTGGATCCTCTAACATTGTCCTCAGAGGCTGTGAGCTCAAGAATACTAATTGGGCACTTGGTGTTGCCGTGTATTGTGGCCGTGATACCAAAGCTATGCTCAACAGCTCTGGAGCTCCATCCAAAAGGAGCCTTCTTGAGACTCGCATGAACTCTGAGATCATTATGCTTTCTTTCTTTCTCGTAGCTTTGTGTATAGTGACCTCAGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGGATGAGTTGAATCTCATGCCTTATTATAGGAAACTGGATGTTTCGGAGGGGAAAGAGGAAAGCTATAAATATTATGGATGGGTACTGGAAATTGTTTTCACTTTCCTCATGTCAGTTATAGTTTACCAGGTTATGATCCCTATATCCTTGTACATTTCGATGGAGCTTGTACGTGTTGGTCAGGCATACTTCATGATCGGAGACTCCAGAATGTATGATAAGGCAACAGAGTCAAAATTTCAGTGCAGAGCTTTGAATATTAACGAAGATTTAGGCCAAATTAAATATGTCTTTTCTGACAAAACTGGCACACTGACTGAGAACAAGATGGAGTTTCAATGTGCAAGCATCTTGGGGTTTGATTACAGTTCTGCAACAGCCAGTCTTGAGAATGAGCAAGTTGAATACACAGTTCAAGCGGATGGGACGATCTTTAAGCCAAAGATGATGGTGAAAGTTAATCAAGAGCTTTTGCAATTATCAAAAAGTGGATTTACAAATGACGAGGGGAAACAGATTTATGATTTCTTTCTAGCATTGGCAGCCTGCAATACCATTGTACCTCTTGTTGCTGACACATCTGACCCTATGGTCAAGCTGATAGATTATCAAGGGGAATCACCAGATGAGCAAGCATTGACTTTTGCTGCCGCTGCGTATGGGTTTATGCTTATTGAACGAACCTCAGGTCACATAGTCATTGATATTCATGGAGAGAGACAAAGGTTCAATGTCTTAGGTTTGCATGAATTTGACAGTGATCGAAAAAGGATGTCAGTTATCCTGGGGTACAGTGACAATTCTGTGAAACTTTTTGTTAAAGGGGCAGATACATCCATGCTTAGATTGATTGACAAATCATTGAACACAGACATACTACATGCAACTAAATCCCATCTTCACACTTATTCCTCTGTGGGTTTGAGGACACTTGTTATTGGGACGCGAGACTTAGATGCTTCAGAATTTGAGCAATGGCAATCTTCCTTTGAGGTAGCAAGTACTGCTTTGATGGGTAGGGCTGCTTTGCTTCGCAAGGTCGCTATCAATATTGAGAACAAGCTCTGCATATTGGGTGCAACTGCTATTGAAGATAAACTGCAGCAAGGTGTGCCAGAATCTATTGAGTCTCTAAGAATTGCAGGTATTAAAGTATGGGTCTTGACTGGGGACAAACAGGAAACTGCCATATCAATTGGATACTCCTCTAGGCTCCTAACGAGCAACATGATTCAAATTATAATTAATACCAACAATAGAGAGTCGTGTAGAAGACATTTACAAGATGCCCTTGTCATGTCTAGACAACATATGACTACGCCCGGTGTTACTCACAATTCAGAGGAAGGATCAGATTCTGTTTCAACTTCATTTGCCTTGATTGTTGATGGTACCAGCCTTGTTTATATTCTTGACAGTGAGCTTGAAGAAGAATTCTTTCAACTTGCAAGTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCTCCACTACAGAAGGCTGGAATTGTTGCCCTTGTGAAGCATAGGACAGATGACATGACGCTAGCCATTGGAGATGGTGCTAATGACGTATCGATGATCCAAATGGCTGATATCGGAGTTGGAATCAGTGGACAGGAAGGTCGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTAGGTTCTTAGTTCCTCTCTTATTAATACATGGGCATTGGAATTACCAGCGACTGGGTTACATGATAACATACAACTTTTACAGAAATGCAATCTTTGTTCTTGTCCTATTTTGGTATGTGCTCTTTACTGCCTTCACATTAACAACTGCTATAAATGAATGGAGCAGCATGTTATACTCGATAATCTACACTGCGTTGCCAACTATTGTTGTTGGTATTCTTGACAAGGATCTTAGTAAAAGGACTCTTCTAAAGCATCCTCAGCTTTACGGGGCTGGGCTGAGAAATGAGGCCTACAACAAAAAATTGTTTTGGTTGACAATGGCCGATACTTTGTGGCAAAGCATTGCAGTCTTCTTTGTTCCCCTTATCGCATATTGGGGAACCACAATAGATGTAGCAAGCATAGGTGATCTTTGGACTCTTGCAGTAGTTATTTTGGTTAATTTGCATCTGGCCATGGATGTCATCAGGTGGAATTGGATTACTCATGCAGCCATTTGGGGCTCTATTATTGCAACCTTCATCTGTGTCATAGTTATTGATGCTATACCAGTATTTCCTGGTTACTGGGCTATCTTTGATGTTGCAGGCACTGCATTGTTCTGGCTATGTTTGCTTGGAATTGTAATAGCCGCATTACTTCCCCGATTAGTTGTAAAATATCTTTATCAGTACTATTTTCCCAGTGATATTCAGATTTCAAGAGAAACTGAGAAGTTTGGGAATCCAAGAGACAATGGTGGAGGAGAAATAGAAATGCTTCCTGTTTCAGATGCTCCACCATGA 3552 0.4133 MEPSTPLDSSSNMDSFMFDSSSRRSTVSIHSRSSGVINSTREVSFGHSGSKPVRYGSKGAESEALSMSQKEISDEDARLVYVDDPDKTNDMLEFAGNSILTGKYSIFTFLPRNLFEQFHRVAYIYFLVIAILNQLPQLAVFGRGVSILPLAFVLLVTGVKDAFEDWRRHRSDKIENNRLGLILVNGQFLEKKWKHIRVGEVIKIRANETIPCDIVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQSKLPEKEKLDVLIKCEKPNRNIYGFQGNIEVDGKRLSLGSSNIVLRGCELKNTNWALGVAVYCGRDTKAMLNSSGAPSKRSLLETRMNSEIIMLSFFLVALCIVTSVCAAVWLKRHKDELNLMPYYRKLDVSEGKEESYKYYGWVLEIVFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIGDSRMYDKATESKFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASILGFDYSSATASLENEQVEYTVQADGTIFKPKMMVKVNQELLQLSKSGFTNDEGKQIYDFFLALAACNTIVPLVADTSDPMVKLIDYQGESPDEQALTFAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGYSDNSVKLFVKGADTSMLRLIDKSLNTDILHATKSHLHTYSSVGLRTLVIGTRDLDASEFEQWQSSFEVASTALMGRAALLRKVAINIENKLCILGATAIEDKLQQGVPESIESLRIAGIKVWVLTGDKQETAISIGYSSRLLTSNMIQIIINTNNRESCRRHLQDALVMSRQHMTTPGVTHNSEEGSDSVSTSFALIVDGTSLVYILDSELEEEFFQLASRCSVVLCCRVAPLQKAGIVALVKHRTDDMTLAIGDGANDVSMIQMADIGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMITYNFYRNAIFVLVLFWYVLFTAFTLTTAINEWSSMLYSIIYTALPTIVVGILDKDLSKRTLLKHPQLYGAGLRNEAYNKKLFWLTMADTLWQSIAVFFVPLIAYWGTTIDVASIGDLWTLAVVILVNLHLAMDVIRWNWITHAAIWGSIIATFICVIVIDAIPVFPGYWAIFDVAGTALFWLCLLGIVIAALLPRLVVKYLYQYYFPSDIQISRETEKFGNPRDNGGGEIEMLPVSDAPP 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03644 1183 SFLD p-type atpase 447 934 IPR044492 -
Spst3g03644 1183 Gene3D - 160 321 - -
Spst3g03644 1183 Pfam Phospholipid-translocating P-type ATPase C-terminal 911 1151 IPR032630 -
Spst3g03644 1183 ProSitePatterns E1-E2 ATPases phosphorylation site. 466 472 IPR018303 -
Spst3g03644 1183 PRINTS P-type cation-transporting ATPase superfamily signature 883 902 - -
Spst3g03644 1183 PRINTS P-type cation-transporting ATPase superfamily signature 464 478 - -
Spst3g03644 1183 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 71 1161 - -
Spst3g03644 1183 Gene3D - 720 923 IPR023214 -
Spst3g03644 1183 Pfam Cation transport ATPase (P-type) 572 647 - -
Spst3g03644 1183 Pfam Phospholipid-translocating ATPase N-terminal 80 145 IPR032631 -
Spst3g03644 1183 SFLD Haloacid Dehalogenase 447 934 - -
Spst3g03644 1183 FunFam Phospholipid-transporting ATPase 568 701 - -
Spst3g03644 1183 MobiDBLite consensus disorder prediction 1160 1183 - -
Spst3g03644 1183 NCBIfam HAD-IC family P-type ATPase 854 969 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g03644 1183 NCBIfam HAD-IC family P-type ATPase 395 485 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g03644 1183 CDD P-type_ATPase_APLT_Dnf-like 96 1043 - -
Spst3g03644 1183 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 1150 IPR023298 -
Spst3g03644 1183 NCBIfam phospholipid-translocating P-type ATPase 94 1158 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst3g03644 1183 SUPERFAMILY HAD-like 451 924 IPR036412 -
Spst3g03644 1183 FunFam Phospholipid-transporting ATPase 152 321 - -
Spst3g03644 1183 MobiDBLite consensus disorder prediction 1 35 - -
Spst3g03644 1183 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 470 736 IPR023299 GO:0000166
Spst3g03644 1183 Gene3D - 558 702 IPR023299 GO:0000166
Spst3g03644 1183 FunFam Phospholipid-transporting ATPase 720 923 - -
Spst3g03644 1183 SUPERFAMILY Calcium ATPase, transduction domain A 181 318 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03644 Spst-Chr3 86464224 86473526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03644 1 1182 Primary Pumps ATPases AT5G04930 68.608 0.0 1714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03644 K14802 - gmx:100784988 2070.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03644 3 86464224 86473526 Spst3g03644 3 86464224 86473526 ECH