Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03627 ATGGAAGAAACAGCTTCCGTAGGACGTGGCGTTGTTTGGAAACTGGACCGATTGGAACCGAAAAGATGCGTCGTCGACGAGGATAAGAAAAAGGAACATAAATCGTGGGACAGACATCACCGTCGAACAAAGTGTCAAAGAAAGGGTCAACAATATGTGGAAATGCTAGTTTGTGGATTTTCCATTTTTATTGTTTTCGATTTGTTTGATTCGTGCAGAATGGAGACTAGTAGAATGGGCCAATGGTTAAGTGTACTGATATGTGTATTAATGTTACTAAAGGCAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCGGCTTACCATTTCCATAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTTCTTGCCTTTCCCGTAGGGACACTCGGTTAGGCTCATCTAAGAAAATGGATACCCAACTTTCCTTTTCTGGATTTTTTAGTAACGGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCAGCAACCAATTTGCACTTCAGAGGAGCAAGGATTTTTTCTGCTGTTGTTGAAGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCTGGATGTTCCGCTGGAGGATTGGCTGCAATCTTAAACTGTGACCGATTCAAAACACTACTACCTGGAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTATTTTATCAATGTAAAGGACGTCTCAGGGGCACAACGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATAGCTCAGCTAAGAATTTGCCTGCATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCACAAAATGTGGTATCACAAATCAGTACGCCAATCTTCTTCGTAAATGCAGCCTATGATTCATGGCAGATCAAAAACATTTTGGCACCAGGCGCTGCTGATCCCCATGGCCAATGGCGTGAATGCAAGCTTGATATAAAAAACTGCTCACCTAATCAACTCGGTGTAATGCAAGCATTCAGGACTGATTTCCTAAGTGCATTTGGTGCGGTTGGGAAATCACCATCTAAAGGGCATTTTATAGATGGTTGTTATGCTCACTGCCAAACTGGAACACAAGAGACATGGTTGAGAAATGACTCTCCTGTGCTAGGCAACACAACAATTGCAAAGGCAGTGGGAGACTGGTTTTATGATCGAAGGCCTTTCAATCAGATAGATTGTGCCTACCCTTGCAACCCCACCTGCCACAATCGTGTTTTTGATCAGGATTAG 1404 0.4266 MEETASVGRGVVWKLDRLEPKRCVVDEDKKKEHKSWDRHHRRTKCQRKGQQYVEMLVCGFSIFIVFDLFDSCRMETSRMGQWLSVLICVLMLLKAEGVPVGITFVENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTSCLSRRDTRLGSSKKMDTQLSFSGFFSNGKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARIFSAVVEDLLAKGMKNAQNAIISGCSAGGLAAILNCDRFKTLLPGTTKVKCLADAGYFINVKDVSGAQRIEEFYSQVVQTHSSAKNLPASCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPHGQWRECKLDIKNCSPNQLGVMQAFRTDFLSAFGAVGKSPSKGHFIDGCYAHCQTGTQETWLRNDSPVLGNTTIAKAVGDWFYDRRPFNQIDCAYPCNPTCHNRVFDQD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03627 467 PANTHER NOTUM-RELATED 84 461 IPR004963 GO:0016787
Spst3g03627 467 Pfam Pectinacetylesterase 94 444 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03627 Spst-Chr3 86324742 86329797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03627 78 464 Carbohydrate Esterase AT4G19420 61.374 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03627 K19882 - gmx:100781246 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03627 3 86324742 86329797 Spst2g01100 2 9683466 9696680 PCT