Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03626 ATGGAGAAAGCAGGAATCATCCAATGGTTAAATCTTATAGTCTGTGTACTGCTACTGCTTGAGGCAGAGGGATCTTTGGTTCCATTGACTTTGGTCGAGAATGCAATATCACAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGAGTTGGAGAAGGGATTAACAGCTGGATTGTTCACATGGAGGGAGGAGGATGGTGCAAAGATGTCAACGATTGCCTTGGGCGTAAGAAAAGTCGCTTAGGTTCATCTAATCAAATGGTTGAGGACATTTACTTTAGTGGAATTTTAAACAACGACCGACAGTATAATCCAGATTTCTACAATTGGAATAGAGTCCTGGTTAGGTACTGTGATGGGTCATCCTTTACTGGTGATGTGGAGGAAGTTGATCCAACAAACAATTTGTACTTTAGAGGAGCAAGGATTTTTTCAGCTGTAATGGAAGATTTACTAGCACAAGGATTGGAAAAGGCTGAAAATGCTATTCTAACTGGCTGTTCAGCTGGAGGATTGACTACTATATTACAGTGTGATAATTTTAAATCTCTGTTGCCTTCTGGAGCTAATGTAAAATGTGTTCCAGATGCCGGTTATTTTATCAATGCCAAGGATATCTCAGGAGCACATTTCATTGAAGAGTTCTACAGTAAAGTTGTTTCGACACACGGATCAGCAAAGAATTTGCCCGCAGCCTGCATTTCCAAACTCACCCCAGGACTATGCTTTTTCCCAGAAAATGTGGTATCACATATCAGTACTCCAATCTTCGTAGTAAATTCAGCCTATGACTCATGGCAGATCCAGAACATCTTGGCACCTGGTGCTGCTGATCCCAGTGACAAATGGCATAGCTGCAAGCTTGATTTAAGAAGCTGCTCATCTGATCAACTACGTATACTGCAAGATTTCAAGGAAGAATTTGAAAAGGCAGTGAGTGTGGTTGGAGACTCTCCATCTAAAGGAATGTTTATAGACGCTTGCTTCACCCACTGTCAAACATTATCAACGGAGACATGGTTTAAAGCTGACTCACCACATCTTGCCAATACAACAATTGGTAAGGCAGTAGGGGACTGGTTTTATGATCGGAGCCCTTTCAGCCATGTAGATTGCAATTATCCTTGCAACCCCACTTGTCAGAACAGTGTTTCTGATCTAAAAGACCACCCTGGAATATAG 1200 0.42 MEKAGIIQWLNLIVCVLLLLEAEGSLVPLTLVENAISQGAVCLDGSPPAYHFDKGVGEGINSWIVHMEGGGWCKDVNDCLGRKKSRLGSSNQMVEDIYFSGILNNDRQYNPDFYNWNRVLVRYCDGSSFTGDVEEVDPTNNLYFRGARIFSAVMEDLLAQGLEKAENAILTGCSAGGLTTILQCDNFKSLLPSGANVKCVPDAGYFINAKDISGAHFIEEFYSKVVSTHGSAKNLPAACISKLTPGLCFFPENVVSHISTPIFVVNSAYDSWQIQNILAPGAADPSDKWHSCKLDLRSCSSDQLRILQDFKEEFEKAVSVVGDSPSKGMFIDACFTHCQTLSTETWFKADSPHLANTTIGKAVGDWFYDRSPFSHVDCNYPCNPTCQNSVSDLKDHPGI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03626 399 PANTHER NOTUM-RELATED 13 388 IPR004963 GO:0016787
Spst3g03626 399 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03626 Spst-Chr3 86313381 86315994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03626 8 399 Carbohydrate Esterase AT4G19420 53.864 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03626 K19882 - gmx:100780707 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03626 3 86313381 86315994 Spst3g03626 3 86313381 86315994 ECH
Spst2g01100 2 9683466 9696680 Spst3g03626 3 86313381 86315994 PCT