Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03613 ATGGAACTCAGCACTGCCTTCTGCTTGTCTGCTGCTTTCCTATCCATTCTTCTCTTCAAATCACTCGTCAAATTATTCTTCTTCTCGTTCCCTTCCAAAGGGAACAGACAATTGCCACTTCCTCCAGGAACCATGGGTTGGCCTTACATAGGAGAAACTTTTCAAATGTATTCTCAAGACCCAAATGTTTTCTTTGCCACAAAAATCAACAGGTTCAAAACAATTCCTTTCTCACTCTCATCAACCCTGTCAATCTTGTTCAAGAAAATGGTCACTTGCATTAGCATATGTACATCTACTGTTCGGTATGGCTCTATGTTTAAGTCACACATTTTGGGTTATCCTTGTGTGATGATCTCTAACCCGGAAGCTGCAAAGTTTGTGCTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCTAGCAAAGAGAGGATGTTGGGGAAGCAAGGAATTTTCTTTCACCAAGGAGCATACCATGCTAACCTCAGAAGGCTTGTCCTTCGCACCTTCAAGACTGAGGCCATCAAAGATATAGTCTCTGACATTGAATCCATTGCCCTAAGTTGCCTCAACTCATGGGAAGGAAAGCTGATCACAACTTTTCTTGAAATGAAAAGTTATACCTTCAATGTGGCCCTGCTTTCAATTTTTGGAAAAGATGAAAATCTGAATGAAGAGGGTCTGAAGCGATGCTACTACACCCTCGAGAGAGGGTACAACTCAATGCCTATAAACCTTCCAGGAACACTTTTCCACAAGGCCATGAAGGCAAGAAAAGAGCTTGCCCAGATCTTGGCCCAAATCATCTCAACAAGGAGGAAGATGAAGCAAGAACACAATGACTTGATGGGCTCGTTCATGAGTGAAAAAGCAGGACTCACTGATGAACAGATAACAGATAACATCATTGGTGTCATTTTTGCTGCTCGTGACACCACTGCCACAGTACTTACATGGATTATTAAGTACCTCGGCGAAAACCAGAGTGTCTTAGAAGCAGTAACAGAGGAGCAGGGGTCCATTTTAAGGGGTAAGGAAGAAAATGGGGAAGAAATGGATCTGAATTGGTCAGACACAAAAAATATGCCTGTGACATCAAGAGTTATTCAGGAGACTCTAAGAATAGCATCAATTTTGTCTTTTACTTTCAGAGAAGCGATAGAAGATGTTGAATTTCAAGGGTATCTCATACCAAAAGGGTGGAAAGTACTACCACTTTTCAGAAACATCCACCACAGTCCTGACAATTTCAAAGAGCCAGAGAAGTTTGATCCTTCAAGATTTGAGGTGACTCCAAAGCCTGATACTTTTATGCCATTTGGCAATGGGACCCATGCATGTCCTGGCAATGAATTAGCAAAGTTAGAGATTTTGGTGCTTCTACATCACCTGACCACAAAATACAGTTGGTGTATTAAAGATGCAAAAAATGGAATTCAGTATGGTCCTTTTGCCCTTCCACAAGATGGATTGCCCATTACAATATATCCCAAACACAATTATCATTCAAATAAAACGTGGAGGCCTACTAACAATTGA 1542 0.4125 MELSTAFCLSAAFLSILLFKSLVKLFFFSFPSKGNRQLPLPPGTMGWPYIGETFQMYSQDPNVFFATKINRFKTIPFSLSSTLSILFKKMVTCISICTSTVRYGSMFKSHILGYPCVMISNPEAAKFVLNKAQLFKPTFPASKERMLGKQGIFFHQGAYHANLRRLVLRTFKTEAIKDIVSDIESIALSCLNSWEGKLITTFLEMKSYTFNVALLSIFGKDENLNEEGLKRCYYTLERGYNSMPINLPGTLFHKAMKARKELAQILAQIISTRRKMKQEHNDLMGSFMSEKAGLTDEQITDNIIGVIFAARDTTATVLTWIIKYLGENQSVLEAVTEEQGSILRGKEENGEEMDLNWSDTKNMPVTSRVIQETLRIASILSFTFREAIEDVEFQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVTPKPDTFMPFGNGTHACPGNELAKLEILVLLHHLTTKYSWCIKDAKNGIQYGPFALPQDGLPITIYPKHNYHSNKTWRPTNN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03613 513 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PANTHER CYTOCHROME P450 26 37 472 - -
Spst3g03613 513 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 Pfam Cytochrome P450 102 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Spst3g03613 513 FunFam Abscisic acid 8 81 498 - -
Spst3g03613 513 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 Gene3D Cytochrome P450 73 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03613 513 CDD CYP90-like 102 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03613 Spst-Chr3 86195247 86197810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03613 9 494 Cytochrome P450 AT4G19230 64.837 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03613 K09843 - gmx:100807446 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03613 3 86195247 86197810 Spst3g03613 3 86195247 86197810 ECH
Spst2g01062 2 9352243 9354539 Spst3g03613 3 86195247 86197810 PCT