Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03608 ATGAAACCACTGACAACAAGAGGACTATCGCAACGCCACGGGTTGCTCGCCGCGTTGCTGAGTTCGCTCGCCGCAGGAGCCGCCATTGGCGCTCCCAGCGGCGGGGAGGTTCTCCGCCTCCTTGTTTTGGAGCGACATGTTGACCTACAACGCCATGTGGTACACCGCGGTTCCCACGGTGCACCAAATCTTTGCCTCGCTTGCACCGATCATAATGGAGCGGTTGGAGAGGCGTTTGGGGCACCGGTTTTGGAGGCCTATGCTATGATGGAAGCATCGCATTTGATGTCTACGAACCCATTACCCAAAGATGGGCCTCATCGAGCTGGGTCAGTTGGAAAGCTCGTGGGCCAGGAAATGGCGATTTTAGATGAGAAGGGTGAGATTCTAAAGAATGAAGTTAAAGGCGAGGTTTGTATTAGAGGACCCAACGTGACCAAAGGGTATAAAAATAACCCTGATGCAAATATTTCTGCGTTTCAATACGGGTGGTTCCACACCGGTGATATTAGTTTTTTTTTTTTTATTCGGATGGATATTTGCACCTCGTGGGTCACATCAAGGAGCTTATTAACTGTGGAGGTTTAG 588 0.5051 MKPLTTRGLSQRHGLLAALLSSLAAGAAIGAPSGGEVLRLLVLERHVDLQRHVVHRGSHGAPNLCLACTDHNGAVGEAFGAPVLEAYAMMEASHLMSTNPLPKDGPHRAGSVGKLVGQEMAILDEKGEILKNEVKGEVCIRGPNVTKGYKNNPDANISAFQYGWFHTGDISFFFFIRMDICTSWVTSRSLLTVEV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03608 195 PANTHER ACYL-COA SYNTHETASE 75 172 - -
Spst3g03608 195 Gene3D Luciferase; Domain 3 106 171 - -
Spst3g03608 195 Pfam AMP-binding enzyme 77 172 IPR000873 -
Spst3g03608 195 SUPERFAMILY Acetyl-CoA synthetase-like 10 172 - -
Spst3g03608 195 Gene3D - 74 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03608 Spst-Chr3 86174478 86177171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03608 72 173 Monolignol Biosynthesis Gene Families AT3G21240 36.190 2.69e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03608 K22133 - gmx:100783685 182.185