Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03607 ATGACAGAAAACTGCATAGCACCCAAACCAGACCACAGCAACAGTCACCCTGAAGAAGGACCACCTAAGATGACTGAGACTGCTCTTCCCATACAAACAAACGAGCAATCTTTTCTAAAACTGGCTATGTACCCCATAACATTGAAGTTTGAGGAATTGGTGTACAAAGTTAAAGTAGAGCAGAAGGGTGTGTGCTGGGGGAGCACAAGGAGTTCAAGAGAGAAGACCATACTGAAAGGAGTCACTGGTATGGTTTGTCCAGGAGAAATAATGGCTATGTTGGGGCCATCTGGCAGTGGCAAAACCACACTTCTCACAGCCCTTGGAGGAAGGCTTAGTGGCAAACTATCTGGAAAGGTCACATACAACAACCAGCCTTTTTCAGGTGCCATAAAAAGAAGAACAGGTTTTGTGGCCCAGGATGATGTGTTATACCCTCATCTCACTGTGACTGAGACTCTACTCTTCACCGCACTTCTGAGGCTCCCCAACAGCTTGACCAAGGAAGAAAAAGTTCAGCATGTAGAACATGTTATCAGTGAGCTAGGACTGAGCCGGTGCAGGGGTAGCATGATTGGAGGCCCACTTTTCAGAGGGATATCAGGAGGGGAGAGAAAGAGGGTGAGCATAGGCCAGGAAATGCTCATCAATCCAAGCCTGTTGCTGCTTGATGAGCCCACTTCAGGGTTGGACTCTACAACAGCCCAAAGGATCATATCTACAATCAAAAGCTTGGCTAGTGGGGGGAGAACTGTTGTCACCACCATTCATCAACCCTCTAGTCGCCTCTATCACATGTTTGATAAAGTGGTCTTGCTCTCTGAAGGATGCCCCATCTATTATGGCCCTGCTTCAACTGCAATGGACTACTTTTCTTCTGTTGGTTTTTCCACGTCCATGATTGTCAATCCAGCAGATTTGTTGCTTGATCTTGCCAATGGGATTGCTCCGGACTCCTCCAAGCATACAACTGAACAAAGTGAAAGCCAGGATGCAGAAAAGAAGTTGGTTAGAGAAGCATTAATCTCTGCTTATGACAAAAATATAGCTACTAAAGTGAAAGATGAGTTATGCAGCTTTGAATTGAATAACTACAAAGTCATTAAGGATGCTTCCACAAGAAATCACACAAAACCCGAGCAATGGTGCACAAGTTGGTGGCATCAGTTCAAAGTGCTGTTGCAAAGGGGGCTGAGGGAGAGAAGGTTTGAAGCCTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGAGGACTTCTGTGGTGGCACACCCCAGAATCACACGTTGGAGATCGGATAGCCCTGCTATTTTTCTTCTCTGTCTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTCACATTTCCACAAGAGAGAAGAATGCTGATCAAGGAACGTTCATCTGGGATGTACCGTCTTTCTTCCTACTTTCTAGCTAGAACAGTAGGAGACTTGCCAATAGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAGCCTCATCCAGTGACCTTTCTCCTTTCCCTCCTAGTGGTCCTTTACAGTGTCCTTGTCTCTCAAAGCCTTGGCTTAGCACTTGGTGCCATTTTGATGGAGGTCAAACAGGCCACTACTTTAGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGCTACTATATACAACAGATTCCTCCCTTCATAGAGTGGCTCAAGTACTTAAGCTATAGCTACTACTGCTACAAGCTTCTTGTTGGTGTACAGTACAATTATGATGATTATTATGAGTGCTCAAAAGGGGTATTGTGCAAGGTTGGAGAATTTCCTCCAATCAAATCAGTGGGTTTGAACCACTTGTGGGTTGATGTGGCTATTATGGCCATGATGTTGGTAGGTTACCGACTAGTTGCTTATTTAGCACTGCAGAGAGTGAGGTAG 1953 0.4516 MTENCIAPKPDHSNSHPEEGPPKMTETALPIQTNEQSFLKLAMYPITLKFEELVYKVKVEQKGVCWGSTRSSREKTILKGVTGMVCPGEIMAMLGPSGSGKTTLLTALGGRLSGKLSGKVTYNNQPFSGAIKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPNSLTKEEKVQHVEHVISELGLSRCRGSMIGGPLFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIISTIKSLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASTAMDYFSSVGFSTSMIVNPADLLLDLANGIAPDSSKHTTEQSESQDAEKKLVREALISAYDKNIATKVKDELCSFELNNYKVIKDASTRNHTKPEQWCTSWWHQFKVLLQRGLRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHVGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTVGDLPIELALPTAFVFIIYWMGGLKPHPVTFLLSLLVVLYSVLVSQSLGLALGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKLLVGVQYNYDDYYECSKGVLCKVGEFPPIKSVGLNHLWVDVAIMAMMLVGYRLVAYLALQRVR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03607 650 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g03607 650 Gene3D - 65 294 IPR027417 -
Spst3g03607 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 643 - -
Spst3g03607 650 SMART AAA_5 87 277 IPR003593 GO:0016887
Spst3g03607 650 Pfam ABC-2 type transporter 389 594 IPR013525 GO:0016020|GO:0140359
Spst3g03607 650 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 300 IPR003439 GO:0005524
Spst3g03607 650 CDD ABCG_EPDR 45 282 - -
Spst3g03607 650 Pfam ABC-2 type transporter 257 324 IPR043926 GO:0140359
Spst3g03607 650 Pfam ABC transporter 78 228 IPR003439 GO:0005524
Spst3g03607 650 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524|GO:0016887
Spst3g03607 650 FunFam ABC transporter G family member 22 65 294 - -
Spst3g03607 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03607 Spst-Chr3 86160199 86163406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03607 77 276 Calmodulin-binding Proteins AT2G36910 28.365 5.42e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03607 K05681 - gmx:100776279 1199.5