Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03605 ATGGCAGCCGTGTCGGGGGGTGAGATATGGAAAGCCCACACGGCCATGGCAATGGTGCAGTTATTCAACGGCGGCTTTCACGTCATCACCAAAGTCGCCCTTAACGTTGGCGTCAACCAAATCGTCTTCTGCGTTTTCCGCGATCTCATTGCTCTCTCCATTCTCGCTCCCCTCGCTTTTATCCGTGAAAAGCGTACACGGCCACCATTAACTAAACACCTTCTGATGTCATTTTTCTTTCTTGGATTAACTGGGATATTTGGCAACCATCTTTTGTTTCTTGTTGGCTTAAGCTATACTAGTCCAACGTATGCTGCTGCGGTTCAGCCAGCCACGCCGGTCTTTACTTTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTGCTAAGGTATGAAGGTTTGGCCAAGGTTGGAGGAACTTTCACCTGTGTTCTAGGCGCTGTACTGATGGTTTTGTATCGTGGTCCGGCATTGATAGGATATTCAGAAACAGACTTTGTATCACACAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTAGTGGTTTACTAGATCTCGGATTTGATCAATTTCATCTCGGGGTTTTGTGCTTCGTAGGGAACTGCATGTGCATGGCTGCTTTTCTAACCATTCAGGCTCCACTATTGAAAAAGTATCCTGCAAACCTATCCCTCACGGCATATTCATACTTCTTTGGAGCTGTCCTGATGGTAATTACATCATTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACACAGTCTGAAACGATTGCTGTTATTTATGCTGGATTTATTGCATCTGCCCTTAATTATGGACTAATTACATGGTGCAACAAGATCTTGGGGCCAGCCATGGTTGCTCTTTATAATCCACTTCAACCAGGAGCCTCTGCTCTCCTATCCAGAATTTTTCTTGGAAGTCCAATTTACATGGGAAGCATCGTAGGGGGGACTTTGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTACAGAGAAAGACACGCAGCTGCTGCGGTTATTTCTCATGGCTCTTGGGTCTCTGAATCACTTCTCCAAGACAAGAATTCTTACAGAGTTAGCATTTTTTCAGGCCCCCCCAGCATGTCCTCAAAGCCTTCAGATTAA 1158 0.4516 MAAVSGGEIWKAHTAMAMVQLFNGGFHVITKVALNVGVNQIVFCVFRDLIALSILAPLAFIREKRTRPPLTKHLLMSFFFLGLTGIFGNHLLFLVGLSYTSPTYAAAVQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTFTCVLGAVLMVLYRGPALIGYSETDFVSHSEISAKGQPEPSGWLISGLLDLGFDQFHLGVLCFVGNCMCMAAFLTIQAPLLKKYPANLSLTAYSYFFGAVLMVITSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSIVGGTLIIIGLYAVTWASYRERHAAAAVISHGSWVSESLLQDKNSYRVSIFSGPPSMSSKPSD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03605 385 PANTHER WAT1-RELATED PROTEIN 14 344 IPR030184 GO:0016020|GO:0022857
Spst3g03605 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Spst3g03605 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 343 - -
Spst3g03605 385 Pfam EamA-like transporter family 20 136 IPR000620 GO:0016020
Spst3g03605 385 Pfam EamA-like transporter family 200 337 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03605 Spst-Chr3 86105771 86113038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03605 1 271 Nodulin-like Gene Family AT3G45870 67.528 3.71e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03605 - - gmx:100781969 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03605 3 86105771 86113038 Spst3g03605 3 86105771 86113038 ECH
Spst2g01050 2 9201164 9206536 Spst3g03605 3 86105771 86113038 PCT