Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03595 ATGGAGGATTCGACATATGAAGATGGTGTATCGGCGAGAGGTGAGACAAACCAAGGAGAAGCGGTTGAGCGTTTACTTGCTAAGTCGTTTTCGAATAGAAGAAACCAGGGTATAATTAAAAAGAGGAAAAGAAAGATGTTTACGTGCATAGCTTGTACTAAGCAAACGACGGATGAGAGGGACGAAGAAGGAGGAGTCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACACAGATAAAGGATATGGCACTGAAGTTTTCAGGTGCTTACAAACAATGCAAACCCTGTACAGGCTCCAGTAGCTACAAGAAAGGACATAGACCATATCCAGACTTCGATACTATCTCAGAAGGGGTTCCATACCCTTATATCGGGGGTGCAAGCTCAAGTTCAACCCCTGCTTGGGACTTCACAACCTCTCACTACCCTGGTGGTAGATCAGACCCACGATTTGCTGGGGCGTTTGGGGGTGATCGCACCCCTAGAGGACGTGACTCAGCATCAGTTTGTGATGTCGTCTTAGAGGACGAGGATGAGCCTAAGGAGTGGATGGCACAGGTGGAACCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTTAATAAATGGCAAGCACAAAGATGGTGGGGTGAGAATTACGACAGAATCATGGAACTTTATAACGTCCAGAGATTTAATCGACAGGCACTCAACACTCCTCCAAGGTCTGAGGACGAGCCGAGAGATTCTTCCTACTCAAGATTGACATCTGCACAGGAAAGCCCCATGGCCTCAAACAAGGATTGGACTCCCAGGAGTCACTATAAACCCTCTGGGAGCAGAGGATATTACCCCTCTGAACCGTTGGATCACGGTGGAGGTGGTGGCCACTTTCATGCTGGGCCCTCTATGGAACCAGCAAGGGATACCACCGCTTCTAGAGATGAGCCTTCTATCAGCAATGCTAGTGAAATGGAGACAGAATGGGTAGAACAAGACGAACCTGGAGTATACATTACAATCCGGCAGTTAGCTGATGGGACAAGGGAGCTTCGACGTGTCAGATTCAGCCGGGAAAGATTTGGGGAGGTGAATGCAAAAACTTGGTGGGAAGAAAACAGGGAGAGAATACAAGCTCAATACCTTTGA 1191 0.4803 MEDSTYEDGVSARGETNQGEAVERLLAKSFSNRRNQGIIKKRKRKMFTCIACTKQTTDERDEEGGVRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSHYPGGRSDPRFAGAFGGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEPRDSSYSRLTSAQESPMASNKDWTPRSHYKPSGSRGYYPSEPLDHGGGGGHFHAGPSMEPARDTTASRDEPSISNASEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03595 396 MobiDBLite consensus disorder prediction 266 287 - -
Spst3g03595 396 ProSiteProfiles BRX domain profile. 187 242 IPR013591 -
Spst3g03595 396 ProSiteProfiles BRX domain profile. 341 396 IPR013591 -
Spst3g03595 396 Pfam Transcription factor BRX N-terminal domain 69 102 IPR027988 -
Spst3g03595 396 PANTHER PROTEIN BREVIS RADIX-LIKE 1 46 396 IPR044532 -
Spst3g03595 396 MobiDBLite consensus disorder prediction 58 77 - -
Spst3g03595 396 Pfam Transcription factor regulating root and shoot growth via Pin3 187 241 IPR013591 -
Spst3g03595 396 Pfam Transcription factor regulating root and shoot growth via Pin3 340 395 IPR013591 -
Spst3g03595 396 MobiDBLite consensus disorder prediction 251 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03595 Spst-Chr3 85979270 85987425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03595 41 396 Major Intrinsic Protein MIP AT1G31880 68.219 4.17e-171 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03595 - - ccaj:109789470 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03734 3 87376598 87377872 Spst3g03595 3 85979270 85987425 PCT