Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03568 ATGTCAACCCCGTTATCACCATCACCATCACCGGCGTCACTCACTGCCGCATCGCCACCACAACTATCTTCCCCCACAGCGCCTCATAATTCAACTTCACTCTCACCATTGCCATCTCAATCCTTACCTCCGGCTACTGCACCACCACCTTTAGTGTCATCACCACCATCACTGCCTCCACAATCGATAAGTTCGCCATCGGCATCAATTTCTTCTCCACCGCCTCCTCAGAGTTATTCTCCTTCTCCGGCAGCATCTACTACACCTGTAAGTAGTAGTGCACCTCCTCCTCCTACTAGGGCAAGTCCTTTAGATTCTCATTCTAGTCCATCACACACTTTTGCATTGGCTCCACCACCTCCATCAGCTAAAAATTCTGGCCCCCGAAGCAGTGGTGGCACCAGTGCAGTGGCTTTTGTTGGTGTAGTGACAGCAATTGTATTGTTTGGCTTCATTGGCATTGCTATCTGGTGTCTGAGGAGGCAAAAGAAAAGGATTTCCAAGAGTGGTGGTTATGACTTCCCATCCCCACTTGGCTCAACATCTGAGTCAGATTTGTCCTTTATTAAGATCCGTTCTTCAGCTCATCGCATGCAAAGAGCTTCTGGCGGTAATACACCATCAGGACTAGGCAACTCAAGGCCATTCTTGTCATATGAAGAACTAATGAAGGCCACAAACAATTTTTCAACTAAAAATCTTTTGGGTGAGGGAGGATTTGGTTGTGTGTATAAAGGATCACTTCCAGATGGGAGAGAGGTAGCAGTTAAGCAACTGCAAATTGCAGGAAGTCAGGGAGAAAGAGAATTCAAAGCTGAAGTGGAAATTATTAGCCGCATCCATCATCGTCATTTGGTTTCCTTAGTGGGATACTGCATTTCAGAGAGCAAAAGACTACTTGTCTATGACTATGTCCCCAACAGTACCCTTTATTTTCATCTTCATGGTAAAGCTATCAGAGCGCTCAATGGCTGTTTTTCATGA 984 0.4604 MSTPLSPSPSPASLTAASPPQLSSPTAPHNSTSLSPLPSQSLPPATAPPPLVSSPPSLPPQSISSPSASISSPPPPQSYSPSPAASTTPVSSSAPPPPTRASPLDSHSSPSHTFALAPPPPSAKNSGPRSSGGTSAVAFVGVVTAIVLFGFIGIAIWCLRRQKKRISKSGGYDFPSPLGSTSESDLSFIKIRSSAHRMQRASGGNTPSGLGNSRPFLSYEELMKATNNFSTKNLLGEGGFGCVYKGSLPDGREVAVKQLQIAGSQGEREFKAEVEIISRIHHRHLVSLVGYCISESKRLLVYDYVPNSTLYFHLHGKAIRALNGCFS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03568 327 MobiDBLite consensus disorder prediction 1 133 - -
Spst3g03568 327 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Spst3g03568 327 SUPERFAMILY Protein kinase-like (PK-like) 203 318 IPR011009 -
Spst3g03568 327 Gene3D Phosphorylase Kinase; domain 1 191 304 - -
Spst3g03568 327 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 146 319 IPR047117 -
Spst3g03568 327 Pfam Protein tyrosine and serine/threonine kinase 231 317 IPR001245 GO:0004672|GO:0006468
Spst3g03568 327 ProSiteProfiles Protein kinase domain profile. 229 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03568 327 FunFam Proline-rich receptor-like protein kinase PERK8 201 304 - -
Spst3g03568 327 MobiDBLite consensus disorder prediction 41 62 - -
Spst3g03568 327 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03568 Spst-Chr3 85754626 85755989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03568 119 317 Trihelix Transcription Factor Family AT1G68690 60.099 4.88e-77 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst3g03568 PK_Tyr_Ser-Thr 9.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03568 - - gmx:100799296 347.821