Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03567 ATGCCAGTGCTGGACTGGACAAACCGTGTTAAAATTGCGGCTGGAGCAGCCAGAGGAATAGCTTATCTCCACGAAGACTGCAATCCTCGGATTATTCACAGGGATATCAAGTCAGCAAACATTCTTTTAGATTACAACTTTGAAGCTCGAGTCTCAGATTTTGGGCTAGCCAAATTGGCAGTTGATGCAAACTCACATGTAACCACACGTATAGTGGGAACTTTTGGATATGTTGCGCCTGAATATGTATCAAGTGGTAAATTGACTGAGAAGTCAGATGTATACTCTTTCGGAGTCATGCTTTTGGAGCTCATTACTGGAAGAAAGCCAGTGGATGTATCTCAACCAGTAGGTGAAGAGAGTCTAGTTGAATGGGCTCGACCTTTGCTGAGTGAGGCCCTTGATAGTGAGGAGTTTGAGAGTTTGACAGATCCAAATCTAGGAAAAAACTACGTTGAAAGTGAAATGATTTGCATGGTTGAAGTTGCTGCTGCTTGCGTGAGATATTCATCTGCCAGAAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATGGTTTAGCTACGTGTGATCTTTCAAATGGAATGAGATGCTTGCTGCTTCAAATTCTTGTCCTTGTGTTGCTGAAGCTTCCCTGGAAGGTGATCAGGAAAACAAGGGAATATGCAAAGAAAAAGCTTCGTCAAAGGAAGGGAAATGATGATAGAGGGAAGAAGAAGAAGAAGAAGAAGATAGAACTGGGTTCTTATGAAGATGTTCTGGTCCGAATTCACGAGCAGTCTTTCAGAGTTCAAGGAGAGATGGCACTGAGAGATGGTGAAGGACTCAGTTTTAGTGGTTGCATGGATGAAGTTGAGAAGGTGATGGAGGAGTTTTATGAGAAGGGAGAGTTTGGATTTGGGAACTTCTGGGGGAGGGAAGGAGCATGTGGATGTGGGGTTCCTCCTACAATAATCAATGAACATCACATTGATGCTAATTTTGTGAGATATCAAATTCTTGATCTGGTTGGTTCCTTAAACTATGCAGAAACTTGCAACATAAATGGTTCTGATGCTGCTCTTAAAGATTCGTTCAGAAGAATATCATGA 1092 0.4249 MPVLDWTNRVKIAAGAARGIAYLHEDCNPRIIHRDIKSANILLDYNFEARVSDFGLAKLAVDANSHVTTRIVGTFGYVAPEYVSSGKLTEKSDVYSFGVMLLELITGRKPVDVSQPVGEESLVEWARPLLSEALDSEEFESLTDPNLGKNYVESEMICMVEVAAACVRYSSARRPRMGQVVRAFDGLATCDLSNGMRCLLLQILVLVLLKLPWKVIRKTREYAKKKLRQRKGNDDRGKKKKKKKIELGSYEDVLVRIHEQSFRVQGEMALRDGEGLSFSGCMDEVEKVMEEFYEKGEFGFGNFWGREGACGCGVPPTIINEHHIDANFVRYQILDLVGSLNYAETCNINGSDAALKDSFRRIS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03567 363 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 2 228 IPR047117 -
Spst3g03567 363 SUPERFAMILY Protein kinase-like (PK-like) 4 182 IPR011009 -
Spst3g03567 363 ProSiteProfiles Protein kinase domain profile. 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03567 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
Spst3g03567 363 Gene3D Transferase(Phosphotransferase) domain 1 1 194 - -
Spst3g03567 363 SMART serkin_6 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03567 363 FunFam proline-rich receptor-like protein kinase PERK8 1 198 - -
Spst3g03567 363 Pfam Protein kinase domain 11 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03567 Spst-Chr3 85749357 85754563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03567 3 180 Trihelix Transcription Factor Family AT1G68690 76.966 1.32e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst3g03567 Pkinase 5.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03567 - - gmx:100799296 370.933