Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03565 ATGAGTGGTGGCAGGAAGAGGAAGTTGCGTTTAAGCAAGATCTACTCATTCGCATGCTGCAAGGCATCTTTCAGGGGAGATGATTCACAGATTGGCGGAAAAGGTTATTCCAGGGTGGTGTTCTGCAATGAGCCAGATATCTTTGAGGATGGTGTTAAGAATTTTGCAGATAATTCTATCAGATCTACAAAATATACTCTTGCAACTTTCTTTCCCAAATCTTTGTTTGAACAGTTTAGGAGAGTGGCAAACTTCTATTTTTTGGTCACTGGCACCTTGGCCTTCACAAAACTGGCTCCATATACTGCTGTCAGTGCTATTCTTCCACTGATTATAGTTATTGGGGCAACTATGGTGAAAGAAGGCATCGAAGACTGGCGCAGGAAAAAACAGGATATAGAGGTGAACAATAGAAGAGTTAAAGTCCATAAAGTTGATGGTACTTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGAATATAGTGAAGGTAGAGAAAGACGAGTTCTTCCCAGCTGACCTGCTGTTGCTTTCATCCAGTTATGAGGATGCAGTTTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTAAAGTTGAAGCAAGGGTTAGAGGTAACATCTTCCTTACAGGAGGATCTCCACTTCCAAAAATTTAAAGCTACAGTCAAATGTGAAGACCCCAATGCAAATTTGTATTCATTTGTCGGGAGCATGGAGTTCGAAGAGAAAAATTATGCCCTTTCTCCTCAACAAATTCTTCTCCGTGACTCTAAACTTCGAAATACAGACTATATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGACCCACCTTCCAAAAGAAGCAGAATCGAGAAGAAGATGGACAGGGTCATCTATTTCTTGTTTTGTATTTTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTAAAGATGACTTCCAAAATGGGTCGATGAAAAGATGGTATTTAAGACCAGATGATTCTACTATTTTCTTTGACCCAAAAAGACCAGTTGCTGCTGCTTTATTTCATTGTTTGACAGCCTTAATGTTATATGGATTCTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATGGTCAAAGTCCTTCAGAGTATTTTCATCAATCAAGATATCCAGATGTACTACAAGGAAGCAGACAAACCAGCACGAGCTCGTACTTCAAATTTGAATGAGGAGCTTGGCCAAGTTGATACAATACTTTCTGACAAGACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCTGGGGTAGGATATGGCCGTGGTGCCACAGAGGTTGAGAAGGCCATGGGTAGAAGAAAAGGTTCACCACCAATTCATGAGCATGATATTGAATCAGAAGCAGGCAAGATTAGGGGTTCTCTAGATAAAAAAACACTTATTAAAGGTTTTAACTTTGATGATGAAAGAATAAGAAATGGACAATGGGTTAATCAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGCCTATTGGCAATCTGTCATACAGCCATTCCAGAAATGAATGAAGAAACAGGAAATGTTTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTCTGATTGCAGCAAGAGAACTTGGTTTTGAATTCTACAAAAGGGGTCAGACTAGTTTATCTACATTTGAGTTGGATCCAGTTTCTAGCAATAAAGTTGAGAGGAAATACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAAATGAAGAAGGGAAAATTTTGCTTCTCTGCAAAGGTGCCGACAGCATCATGTTTGAAAGGCTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACCAAGGAGCATGTGCACGAGTATGCTGATGCGGGTCTGAGAACCCTTATACTAGCCTATCGTGAACTTGATGCAGAAGAATACAAGGAGTTTGATAATAAATTCTCTAAGGCCAGGAATTTAGTCAGTGCTGATCAGGAGAGACTGATGGAGGAGTTATCAGATAAGATTGAGAAGAACTTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAATATTGGTTTTGCGTGCAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAGGATGGGGACAAGATGGCCATTGCCAAAGCATCAAGGCAAAGTGTCCTCCTTCAGATATCCGAAGGTGTTGCACAACTCGCTTCCTACAGAGGGAGCTCTCAGAAGGCATTTGCACTGATTATTGATGGAAAATCACTTGTTTATGCATTAGAAGACAATATGAAGAACATGTTTCTGGAGCTAGGGATTCGTTGTGCATCTGTTATTTGTTGTCGCTCATCCCCAAAGCAGAAAGCACTGGTCACCAGATTGGTCAAATCTGGAACTGGGAAAACAACATTAGCCATTGGTGATGGAGCTAACGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGCGATATTGCAATTGCACAATTTCGGTATTTGGAACGATTACTTCTGGTGCACGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTACTTTTTCTACAAGAATATCACATTTGGTTTTACTCTATTCTTATATGAGGTTTATGCATCATTCTCTGGACAACCCGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCACTTCCTGTGGTTGCACTTGGGGTGTTTGACCAGGATGTATCCGCTCGGTACTGTCTCAAGTTTCCTTTGTTATATCAAGAAGGAGTACAGAATGTTCTGTTCAGCTGGCGTCGAATACTCAGCTGGATGCTTAATGGATTTATCAGTGCCTTAATAATTTTCTTCTTTTGCACTAAAGCGATGGAACTCCAGGCCTTCGATGCAGAAGGGAGAACTGCTGGAAAGGATATACTGGGAGCAACAATGTATACTTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTGGCTATAAGTTACTTCACCTTGATCCAACATTTTTTCATCTGGGGTTCCATTTTTTTCTGGTATCTTTTTCTCCTGGTATATGGAGCAATGCCTCCACACTTTTCAACAAATGCGTACAAAGTCTTCATTGAAGCTCTTGCTCCTTCCCCTTCCTATTGGCTTGTGACATTCTTTGTGGTGATCTCAACCCTTATACCATACTTCTCGTATGCAGCAATTCAGATGCGGTTCTTTCCCATGTATCATGAAATAGTACAATGGATAAGGTATGAAGGGAAGATTAAGGACCCTGAGTTTTGTGATATGGTGCGGCAGAGATCATTGCGGCCAACAACCGTGGGTTCAACAGCACGCTTAGCTGCTAAGGCTCACCATTGA 3573 0.4081 MSGGRKRKLRLSKIYSFACCKASFRGDDSQIGGKGYSRVVFCNEPDIFEDGVKNFADNSIRSTKYTLATFFPKSLFEQFRRVANFYFLVTGTLAFTKLAPYTAVSAILPLIIVIGATMVKEGIEDWRRKKQDIEVNNRRVKVHKVDGTFEYTAWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLQEDLHFQKFKATVKCEDPNANLYSFVGSMEFEEKNYALSPQQILLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDRVIYFLFCILFLMAFVGSIFFGIATKDDFQNGSMKRWYLRPDDSTIFFDPKRPVAAALFHCLTALMLYGFFIPISLYVSIEMVKVLQSIFINQDIQMYYKEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVGYGRGATEVEKAMGRRKGSPPIHEHDIESEAGKIRGSLDKKTLIKGFNFDDERIRNGQWVNQPHADVIQKFFRLLAICHTAIPEMNEETGNVSYEAESPDEAAFLIAARELGFEFYKRGQTSLSTFELDPVSSNKVERKYKLLNVLEFNSSRKRMSVIVENEEGKILLLCKGADSIMFERLAKNGREFEEKTKEHVHEYADAGLRTLILAYRELDAEEYKEFDNKFSKARNLVSADQERLMEELSDKIEKNLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDSPEIQALEKDGDKMAIAKASRQSVLLQISEGVAQLASYRGSSQKAFALIIDGKSLVYALEDNMKNMFLELGIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAMELQAFDAEGRTAGKDILGATMYTCVVWVVNLQMALAISYFTLIQHFFIWGSIFFWYLFLLVYGAMPPHFSTNAYKVFIEALAPSPSYWLVTFFVVISTLIPYFSYAAIQMRFFPMYHEIVQWIRYEGKIKDPEFCDMVRQRSLRPTTVGSTARLAAKAHH 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03565 1190 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1155 - -
Spst3g03565 1190 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Spst3g03565 1190 NCBIfam HAD-IC family P-type ATPase 838 948 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g03565 1190 SFLD p-type atpase 408 917 IPR044492 -
Spst3g03565 1190 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 702 IPR023299 GO:0000166
Spst3g03565 1190 Gene3D - 548 701 IPR023299 GO:0000166
Spst3g03565 1190 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Spst3g03565 1190 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Spst3g03565 1190 CDD P-type_ATPase_APLT_Dnf-like 57 1026 - -
Spst3g03565 1190 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1144 IPR023298 -
Spst3g03565 1190 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Spst3g03565 1190 SUPERFAMILY Calcium ATPase, transduction domain A 141 283 IPR008250 -
Spst3g03565 1190 FunFam Phospholipid-transporting ATPase 701 906 - -
Spst3g03565 1190 NCBIfam phospholipid-translocating P-type ATPase 55 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst3g03565 1190 Pfam Cation transport ATPase (P-type) 524 627 - -
Spst3g03565 1190 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Spst3g03565 1190 SUPERFAMILY HAD-like 419 921 IPR036412 -
Spst3g03565 1190 Gene3D - 702 906 IPR023214 -
Spst3g03565 1190 SFLD C1.7: P-type atpase like 408 917 - -
Spst3g03565 1190 Gene3D - 116 286 - -
Spst3g03565 1190 FunFam Phospholipid-transporting ATPase 543 701 - -
Spst3g03565 1190 FunFam Phospholipid-transporting ATPase 116 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03565 Spst-Chr3 85731750 85738351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03565 1 1187 Primary Pumps ATPases AT1G68710 73.667 0.0 1889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03565 K01530 - gmx:100781421 2198.32