Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03562 ATGCACCATCGTACCATATGCAAGGGAAAAAGATATGATGTATTGGTTGGAGGAACTCCCACCAATCGAATTGATGCATGTGTATGGGCAGAGAAAAATATTATATCTTCTTCCAACTCTCGGACCCTCTCAAGTAACAAACAAGATTTCGCTCACGCACTCTCTTCTCTCTTCGTTCTCTTCAAAATGCCATCTCAGATTTTTCCCACACCCAATCGTTCTCTTGATTCCGCCTTCTCCACTCCTTCCTCCGCACTCCTCCGACCCAAACAAGACGACGACAATGATCCCTCCGCCAGCCTCCTCCACCATTCTCCCCCAACCTTCCGAGACATGTCCCTCAAGCCACCCTTGCCCAGGGCTTCCAGTTTCACCACCTCCCGCAACAAACCCTCCCGCCCTCCCCACACTTTCAACCAGAAACGCCGCCGCCGTGCCGCCAGCCAGGACTCCCTCCCCTCCGTCTCCGATCAACCTGCCACCGCCACCCGCTCCTCATTCGGGCGCGATGTCGCCGCCGAGACCTTTCTCTTGACTCGCCTTGGCTTCAAGATGCTTGGCTACCTCGGTTTGTCTGGCTCTGAGACACTTGTGGGTCCAATCCGGATTTGGGTAGGCTACAAATGGATTACTAGATTTCTTGCCCTTGGATGTTATGCACTACTTCTTTTTCCAGGCTTTATTCAAGTTGGATATTACTATTTCTTCTCCAATCAGATACGCAGAAGCATAGTTTATGGAGATAAACCGCGAAATAGGCTTGACTTGTATTTACCTAAAAATAGCAATGGTCCAAAACCTGTTGTAGCTTTTATTACTGGTGGAGCCTGGATTATTGGTTACAAAGCATGGGGTTCTCTTTTAGGTCAACAGTTATCAGAGAGAGATATCATTGTGGCATGCATTGATTACAGAAATTTTCCCCAGGGAACCATCAGTGATATGATAGCTGATTCTTCTCAAGGCATCTCATTTGTGTGCAACAATATTGCAGAATATGGAGGTGATCCCAACAGAATTTACCTAATGGGGCAATCAGCTGGAGCACATATTGCTGCATGTGCAATTGTGGAGCAGGCAATCAAAGAGGCAGGTGAAGGAGAGAGTACATGTTGGAGTCTTTCCCAGATTAAGACTTATTTTGGTTTATCTGGAGGTGTCGCAACTGTAATGGGTTTCAGAAATAGGAAGATTCTGTTTGTTCCTGGCAAGCATGAAGAATTGCCAGTCTAG 1233 0.4728 MHHRTICKGKRYDVLVGGTPTNRIDACVWAEKNIISSSNSRTLSSNKQDFAHALSSLFVLFKMPSQIFPTPNRSLDSAFSTPSSALLRPKQDDDNDPSASLLHHSPPTFRDMSLKPPLPRASSFTTSRNKPSRPPHTFNQKRRRRAASQDSLPSVSDQPATATRSSFGRDVAAETFLLTRLGFKMLGYLGLSGSETLVGPIRIWVGYKWITRFLALGCYALLLFPGFIQVGYYYFFSNQIRRSIVYGDKPRNRLDLYLPKNSNGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTISDMIADSSQGISFVCNNIAEYGGDPNRIYLMGQSAGAHIAACAIVEQAIKEAGEGESTCWSLSQIKTYFGLSGGVATVMGFRNRKILFVPGKHEELPV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03562 410 Pfam BD-FAE 254 360 - -
Spst3g03562 410 Gene3D alpha/beta hydrolase 236 401 IPR029058 -
Spst3g03562 410 MobiDBLite consensus disorder prediction 71 164 - -
Spst3g03562 410 MobiDBLite consensus disorder prediction 119 134 - -
Spst3g03562 410 MobiDBLite consensus disorder prediction 71 88 - -
Spst3g03562 410 MobiDBLite consensus disorder prediction 149 164 - -
Spst3g03562 410 SUPERFAMILY alpha/beta-Hydrolases 215 357 IPR029058 -
Spst3g03562 410 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 70 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03562 Spst-Chr3 85716211 85723897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03562 63 386 Carbohydrate Esterase AT1G26120 59.942 1.49e-123 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03562 K15889 - gmx:100790850 523.087