Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03555 ATGGCTCGCTCTGTGCCTTTTCTCTCAACCATTTTTCTATTGCTTTTGCTTCTGCTCGCCACTGCAGAGATGGGGCCAACAATGGTGGCAGAGGCAAGAACTTGTGAGTCTAAGAGCCACCGTTTCAAGGGGCCATGTCTGAGTGACACCAACTGTGGTTCTGTGTGTCGAACTGAACGTTTCACCGGAGGACACTGCCGTGGTTTTCGTCGTAGATGTTTCTGCACCAAACATTGTTAA 240 0.4958 MARSVPFLSTIFLLLLLLLATAEMGPTMVAEARTCESKSHRFKGPCLSDTNCGSVCRTERFTGGHCRGFRRRCFCTKHC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03555 79 ProSitePatterns Gamma-thionins family signature. 33 56 IPR008176 GO:0006952
Spst3g03555 79 Pfam Gamma-thionin family 33 79 - -
Spst3g03555 79 PANTHER DEFENSIN-LIKE PROTEIN 1 11 79 - -
Spst3g03555 79 Gene3D - 33 79 IPR036574 -
Spst3g03555 79 PRINTS Purothionin signature 64 78 IPR008176 GO:0006952
Spst3g03555 79 PRINTS Purothionin signature 34 49 IPR008176 GO:0006952
Spst3g03555 79 SUPERFAMILY Scorpion toxin-like 33 79 IPR036574 -
Spst3g03555 79 SMART gth_4 34 79 IPR003614 GO:0006952
Spst3g03555 79 CDD Knot1 44 76 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03555 Spst-Chr3 85684803 85685245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03555 1 79 Plant Defensins Gene Families AT2G02130 63.291 6.57e-30 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03555 - - gmx:547843 147.902