Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03541 ATGGATAGTCCAATTCGATCGCCAGCTGCCGGTTCAGGTTCCGGCGAAGATAGTCCGCGTGTTAAGTTCTTGTGCAGCTTTCTGGGGAGCATAATGCCCCGTCCCCAAGATGGGAAGCTGCGTTACGTTGGTGGCGAGACGCGAATTGTGAGTGTTTGTAGAGATATTTGCTATGAGGAGTTGATGGGGAAGATGAGAGAGCTGTATGATGGGGCTGCTGTGTTGAAGTATCAGCAGCCTGATGAGGATCTTGATGCTCTTGTTTCTGTCGTCAACGATGATGATGTGGTTAACATGATGGAGGAGTATGACAAGTTGGGGTCAGGGGATGGATTCACTAGGCTCAGGATATTTTTGTTTTCGCAATCCGAGCAGGATGGTTCCTCACATTTCATTGATGGAGATGATTCTGAGAGGAGGTATGTTGATGCATTGAATAGTTTAAATGATGTTGCTGAGTTTAGGAGGTTACAACAAGGAGAGTTTCCTATGATTAACCCTGTCGAGGATATTCATGTGTCTCCTGATCAGTTTTTTAATCCAATGAGTGTGGAAAATGGGATTCATAGTCAGAGAAGTGGGGACCTATCTATGCCACCATATAATTTGCATCATATAACAATCCAGCACCCGCAAACTATGGGCCCAAGGTATAATGAAATGGATTCTCCTTGGAATCCTGCTTATTATTCCCCTAGGCATCATTGTCTCCATGACTCCAGATCATTGGTTGAATTTCCATCTTCGCCATCCAGTAGGTACCGAATGTCATTTCCGGAGTTACCAGATAAGTGCATTGACAGAGTGCCGGAAGAGTATGCTCGACATCATGTAAACCACCATCCTGTGTATGATAATCAACCGCAATATGCTGACAATGTTTTGTGGGTGCCGACTGGAGCATCACATGGTGAAAAGTCCGCTTTTCCATGCAATATTCTTCATGGTCCCCATGTTGTTGAAGGAAACAACATATGTGAGCAGTGTCGCATGGCTTTTCAGAGAGGTCAATCACATCTGGAGCATTCTAATATAAGTAATGGACTTCCACCTGTTGCTAATCCATGTGCAGAATGCCCCCTTCCAAATAGGGATGGTTACCATGATGCAAAGTTACTTCCTGCAATGTATCCCAACGAACCTAATAATGATCATAGGTCTGTTTATAATGATATTCAGAATCATGAGAGAGGGTGGGGTTTGCAGCATCCAACAATTGCTCGTGTTGAGGAATCAAGAGGACACGGCTCTGTATCTGGAAGAGTGAGTGATGTTCCAGTTATAAATTTCTCTCTTGGGCATGGCAGTGTGACTGATGGACATACCCTGTCTTCCAACTATCTTCATCACCAAGTTGGACCTGAATTGGGGCCCGAACTTTTCCCTGATAAAACTATGAATCCAATACCACACGTAAAAATTCCCCAACTAGAAGAATGCAATGTGCGGTATGGAAATTCAACTTCTGCTTATGGAGTAGATAGTAATTATGCTGCGCCTCGTGGACATCCACCTGGATTCTGGAGAAATACTCCAATTCCAGTTCATATGGGAGCATCTTATGAGGCAACTGCCTCACCTCCGCAGATGAATGGTATGATAAATATGACAATAATAAAGGGAGAAGGCAGTCCAGGATTTTACGTTGGATCAGATAGTCAAAATCAATGGGTTGATTCCTCGCAGAAATTGACAGGACATGATGGTACAGCCATCCCAGAACATCCGTATGCGCAAGCTCTGAAGTTGAATCCAACACCCCTTTGTCAAGAAAATCAATACCCAGTTACCGTAGATACAATTCACCCTCCACAGGACATGAGTACTGGTACCTGCTTGGAACCTTTGCAGCTGCCAAAATCATCTTCTAATATAGTCCACAATCAAGAGGTTTTAAGAAATGATACCCATTTGACTGGAGCAAAGGGTTTTGAATCAAATAGTTTGCTTGGAGAAGGAATAGTTGTAAAAATTGAGAAGGTCGAAAACCCTGATACGAAAACTGTATCTTATTCAGAGCAAAATAAAATTGCTAGGAATGCATGTCAAGCTGCTGCTTCTGTTGATTCTAATAATTCGAAGTCAAAACCTGAAGGAGACTGCGGGCATGTTGACAAACTGGCTGAGAAGGACCATTCTATTCCAGAAGATTCTAAGAATTTAAGTTATCAGTTTAGCTTCGTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTAGAAGTTGCTGAGGAGGTGAAAGCTGCAGCTGATGAGCATGCCAATTCTCAGAATCAAAATTCAGATACCAAAGAAGAAACAATAAATGAAGTAGAGCCAACAAATGCTCATGGTGATTTAGAATTGGACTCTGAAAATGACCATGTAGATACTTCTAAAATTGAGCCTACAAAGGCTGAGGAAGAAGCAATTGCTAGGGGATTGCAGACTATTAAAAATGATGATTTGGAGGAGATCCGCGAGCTTGGTTCTGGAACCTATGGAGCTGTCTACCATGGGAAATGGAAAGGTTCTGATGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGGCCATCTGAAAGAGCAAAATTGATTACAGATTTCTGGAAGGAGGCATTGATGTTGAGTTCATTGCATCATCCAAATGTTGTCTCCTTTTATGGCATTGTTCGTGATGGTCCTGACAGTTCTTTAGCAACAGTCACAGAGTTCATGATTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACAATTGATCGTCGTAAGAGGCTCATTATAGCCATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAAGACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGGGATCCTCAACGCCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTTAAACAGCACACACTAGTGTCTGGTGGAGTACGGGGGACTTTGCCATGGATGGCACCTGAACTTCTTAGCGGGAAAAGCAATATGGTATCAGAGAAGATTGATGTCTACTCATTCGGAATAGTTATGTGGGAGTTGCTCACAGGGGCTGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAACAGTTTACGTCCTCAAATCCCAACATGGTGTGATCCTGAATGGAAGTCTCTAATGGAAAGTTGTTGGACTTCTGATCCTGTAGAAAGGCCATCATTTTCAGAAATTTCAAAGAAGCTGAGGAGTATGGCTGCTTCAATGAATGTGAAATAG 3270 0.4239 MDSPIRSPAAGSGSGEDSPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVCRDICYEELMGKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSSHFIDGDDSERRYVDALNSLNDVAEFRRLQQGEFPMINPVEDIHVSPDQFFNPMSVENGIHSQRSGDLSMPPYNLHHITIQHPQTMGPRYNEMDSPWNPAYYSPRHHCLHDSRSLVEFPSSPSSRYRMSFPELPDKCIDRVPEEYARHHVNHHPVYDNQPQYADNVLWVPTGASHGEKSAFPCNILHGPHVVEGNNICEQCRMAFQRGQSHLEHSNISNGLPPVANPCAECPLPNRDGYHDAKLLPAMYPNEPNNDHRSVYNDIQNHERGWGLQHPTIARVEESRGHGSVSGRVSDVPVINFSLGHGSVTDGHTLSSNYLHHQVGPELGPELFPDKTMNPIPHVKIPQLEECNVRYGNSTSAYGVDSNYAAPRGHPPGFWRNTPIPVHMGASYEATASPPQMNGMINMTIIKGEGSPGFYVGSDSQNQWVDSSQKLTGHDGTAIPEHPYAQALKLNPTPLCQENQYPVTVDTIHPPQDMSTGTCLEPLQLPKSSSNIVHNQEVLRNDTHLTGAKGFESNSLLGEGIVVKIEKVENPDTKTVSYSEQNKIARNACQAAASVDSNNSKSKPEGDCGHVDKLAEKDHSIPEDSKNLSYQFSFVPELIASVKKAALEVAEEVKAAADEHANSQNQNSDTKEETINEVEPTNAHGDLELDSENDHVDTSKIEPTKAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERAKLITDFWKEALMLSSLHHPNVVSFYGIVRDGPDSSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKDIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGAEPYADMHCASIIGGIVNNSLRPQIPTWCDPEWKSLMESCWTSDPVERPSFSEISKKLRSMAASMNVK 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03541 1089 Gene3D Transferase(Phosphotransferase) domain 1 902 1089 - -
Spst3g03541 1089 MobiDBLite consensus disorder prediction 775 795 - -
Spst3g03541 1089 Gene3D Phosphorylase Kinase; domain 1 802 901 - -
Spst3g03541 1089 CDD PB1_UP2 24 120 - -
Spst3g03541 1089 SUPERFAMILY CAD & PB1 domains 37 127 - -
Spst3g03541 1089 PANTHER SERINE-THREONINE PROTEIN KINASE 87 1082 - -
Spst3g03541 1089 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Spst3g03541 1089 SMART PB1_new 35 120 IPR000270 GO:0005515
Spst3g03541 1089 ProSiteProfiles Protein kinase domain profile. 816 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03541 1089 SUPERFAMILY Protein kinase-like (PK-like) 808 1077 IPR011009 -
Spst3g03541 1089 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 904 1089 - -
Spst3g03541 1089 CDD STKc_MAP3K-like 822 1079 - -
Spst3g03541 1089 ProSitePatterns Protein kinases ATP-binding region signature. 822 843 IPR017441 GO:0005524
Spst3g03541 1089 Gene3D - 39 123 - -
Spst3g03541 1089 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 809 903 - -
Spst3g03541 1089 SMART serkin_6 816 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03541 1089 Pfam PB1 domain 36 121 IPR000270 GO:0005515
Spst3g03541 1089 Pfam Protein tyrosine and serine/threonine kinase 817 1079 IPR001245 GO:0004672|GO:0006468
Spst3g03541 1089 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 40 122 - -
Spst3g03541 1089 Coils Coil 746 766 - -
Spst3g03541 1089 PRINTS Tyrosine kinase catalytic domain signature 898 911 IPR001245 GO:0004672|GO:0006468
Spst3g03541 1089 PRINTS Tyrosine kinase catalytic domain signature 1006 1028 IPR001245 GO:0004672|GO:0006468
Spst3g03541 1089 PRINTS Tyrosine kinase catalytic domain signature 935 953 IPR001245 GO:0004672|GO:0006468
Spst3g03541 1089 PRINTS Tyrosine kinase catalytic domain signature 1050 1072 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03541 Spst-Chr3 85376814 85382142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03541 20 1089 MAP Kinase Kinase Kinase AT5G57610 54.144 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Spst3g03541 PK_Tyr_Ser-Thr 4.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03541 - - gmx:100779077 1855.11