Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03537 ATGTTCCGTCTCCCCTCCGTGCTCCTCTCCCGCCGCCTCCACCTCCGCAGACTCTCCTCCACGCCCTCGCGCCCTCCTTCCCTCCCTCTCTCCCACCCAATCTACCTCATCTGGGGATCCAACACAGGAGTCGGCAAAACCCTAGTCTCCGCCGGCATCGCTGCCGCCTCTCTCCTCTCCTCCGCCACCACTCCATCCCAATTCCACTACCTCAAGCCCCTCCAAACTGGCTTCCCCGCCGACTCCGACTCCCGCTTCGTCCTCGACAAGCTCCGCCAACTCTCCCTCCTTCGCAACCCTCGCGTCCACCTCTCCTCCTCCCACCGCGTCCTCAACGTGTCTCCCGCTGTGCCGGAGACAATGCCGCTCGCTTGCAAGGAAGGGCATGGCCCTTCGGAGCTGCTCTGCAAGACCCTGTACGCATGGGAAGAGCCCGTGTCGCCGCACTTGGCCGCGGAGAGGGAGGGCCTGGCTGTGAAGGACTCTGTGGTGCTGGAAACCCTTGGCGAGTGTTTCGAGGACGTGGTGGAACGCGGGGCTGGTAGGGATAGATCGGAGGTTCTGTGTGTGGTGGAAACTGCTGGTGGAGTTGCCAGTCCAGGTCCTTCTGGGACGCTTCAATGTGACTTATATAGGTTAAATACTGTTGTTCTTTCATTTCCTGTCAGGCCATTCCGTATTCCTGCAGTTCTCGTCGGGGATGGGCGGCTAGGAGGTATTTCTGGAACAATATCAGCTTATGAGAGCTTGATGCTGCGAGGTTATGATGTTGTTGCTGTTGCTTTTGAAGATCATGGTCTTCTAAATGAGGGTCCACTGATGTCTTATATGCGAAACCAGGTCCCTGTCCTAGTGCTACCACCCATTCCAAAAGATCTGTCAAATGACTTGATGGAATGGTTTGAGAGTTCTCATCATATATTTAGTAATCTAAAGGAAATAATGCTATCAGCTTATTTGGAGAGAATTAAAAGGCTGCAAGACATGCCAAGAGAAGCAAGGGATATTATCTGGTGGCCTTTCACTCAACACAAACTTATTCCTGAGGGAGGGGTCACAGTAATTGATTCACGATGTGGTGAGAACTTTTCTATATTCAAGGTTCAGAAGACAGAAGTCATAGCACCACAATTTGATGCATGTGCTAGTTGGTGGACTCAAGGACCTGATGCTATAATGCAGGCTGCGCTTGCTAGGGAGATGGGATATGCTGCTGCTAGGTTTGGGCATGTAATGTTCCCTGAGAATGTTCATGAGCCAGCCTTAAATTGTGCTGAGCTTTTGCTTCAAGGTGTGGGGAAAGGCTGGGCTTCTCGAACATATTTTTCTGACAATGGATCTACAGCAATTGAAATTGCTCTCAAGATGGCATTTCGTAAATTTTCTGTTGATCATGGGCTTATTGTGGATTGTCTTGAGGATACCACAAACGAAAGATCTGCTGAGCTCATGGTCCTTGCACTGCACAGATCTTATCATGGTGATACACTTGGTGCTATGGAAGCACAGGCACCATCTTCTTATACAGGCTTCCTTCAGCAACCCTGGTACACCGGGAGAGGTCTTTTTCTGGATCCTCCTTCTGTGATTATGCGCAACAATACATGGAATATTTCCATACCTGAAGGGTATAATTGGGAAAGTCTGAAAGGTGAAAGTATCACCTTTGCCTCACGTGATGAAGTATTTCACAAGGGCAGGGATAAGTCTGAGCTTGCTACAGTTTATTCATCTTACATATCAAAAGTATTATCTGGATTTAAAGGCTGTTACGTAGTTATACAAGGCGCTGGTGGAATGCATATGGTTGATCCACTTTTTCAGCGTGTGCTTGTTAATGAGTGTCGAAGTAGAAAAATTCCAGTAATCTTTGATGAGGTTTTTACTGGTTTTTGGCGTTTGGGAGTGGAGACTGCAGGGGGGCTAATCCATTGTGTACCAGATATAGCTTGCTTTGGGAAGCTGCTGACCGGTGGAATCATACCATTGGCTGTCACCTTAGCAACAAATGCTGTTTTTGATTCATTTATTGGAGACTCAAAGCTCAAGGCTCTTTTACATGGGCATTCTTACTCTGCACATGCTATGGGCTGCGCTGCTGCTGTTAAGTCAATCCAATGGTTTAAAGACCCTTGTTCCAACCCTAATATCGCTCCTGAAGGAAGATTACTTAAGGAGTTATGGGATGAGAAAATGGTTCGCCGGATTTCATCACACCCTGCAATTCAAAGAGTAGTGGCTTTGGGAACTTTGTGTGCTTTGGAATTAAAAGCAGAAGGAACTAATGCTGGAATATTACTAGAGTTAAAAGGAAGCTCTCGAGAAAATATGGGTTTGATTTTAACGTGTAAATTGACACAATATCTCTTGGTTGTAAGGTATGGATCGTTATATGCAAGACCACTTCTGGAGAAGCTCAGGGAAGATGGTATATACATGAGGCCTTTAGCTCGACCAAATCAACCACTGTTTTTATCCAGTGTGTTCACTTCGTTTCCAGCTGTTTTTTCAAAATTCGCTTGTAGAGGTTGCATATTTAAGATCTGTTGCGAGTTTCGTCTTTTCGGGGATGTAGCATCTAGGGTTTCATTGCTTAAACCATCTGCTGACGCAATTAGTATGGGGAAAAGGAGCTTGGAGGGTGGAGAAGATGATCAGCCTGAACGAAAGAGGCCTGCTCTCGCCAGTGTAATTGTTGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAGCCTATTCTACGTAGAGTTGTGAGTGAAGAGGTTGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGACTTGGTGGAAGGTCTCCTCCTAAAATGATTGAAGGTCCTGATGGTAGGAACTTGCAGCTGCAATTCAAGTCCCGGTTGTCACTTCCCCTCTTCACAGGAGGAAAAGTGGAAGGCGAGCAGGGGGCGCCAATACATGTTGTTCTGATTGATTCCAATAGTGGAAGCGTTGTAACTTCTGGACCTGAATCCTCTGTAAAACTCGATGTTGTGGTCCTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACTCAAGATGATTTTGAAAGCCACATTGTAAAAGAACGGGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACACTCAAGGAAGGAGTTGGAACATTGGGGGAATTGACCTTTACAGATAATTCAAGCTGGATAAGGAGTCGTAAATTCCGTCTTGGCCTGAAGGTTGCCTCAGGCATTTGTGAGTCCATACGCATTCGTGAAGCTAAGACAGTGGCTTTCATAGTTAAAGATCATAGAGGAGAATTATATAAGAAGCACTACCCTCCTGCATTGACTGATGAAGTGTGGAGATTGGAGAAAATAGGCAAGGATGGATCATTTCACAAGAAGCTGAATAATGCAGGAATAGTCTCAGTTGAAGACTTTCTTCGGCTTGTTGTTAAAGATCAACAGAAATTGCGGAATATCCTTGGAAGTGGTATGTCAAACAAGATGTGGGAGGCTCTTTTAGAGCACGCAAAAACGTGTGTTCTAAGTGGGAAGCTCTATGTTTATTATCCAGAAGATGCAAGAAATGTTGGCGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATATCAGGAGAACAATTCTTTTCTGCGGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCATTGGTGAAGAAAGCATACGACAATTGGGATCAGGTTGTGGATTATGATGGTAAATCACTTGTGAATGGTAACCAAAATAACAGGTCTATTGCATCTGAAAATGAACTTCGTGTTGAGGCAATTGATTACGGTAGTGGTTTAGATCATCAACTTCAACTGCCGGGACTTCCAGTGTCCGTTCCTTCTGAACAGCAAATAAATTCCGGGATGCCAGTTGGGGGTTATAATGATAGTATGGTATCACGATATCCAACCCAGTCATTGATTTCAAACTCCAGCACCCGGAGTCAGTTCGATAGCTCATTATATCTGTCTAATGACCAATTAATCAGCAATAGTCACCAAACCCCAAACACTAGAAATGATCATGGCCCAGTTGGGTTAGCTCTTGGACCTCCTCAATCATCCACGTCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCCATCTACTCTAAACCCTTTTGATGATTGGTCACACAACAGGGACAGGGGGGTTGATGAGTTCTTTTCAGAAGAAGAAATCCGCCTCAGAAGTCACGAAATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGCCACGGCTCCATGAGTGCGGAGGATGGCTATTCATTCCCAACATACATGCCATCACCCAATATACCAAACTATGATGAGGATCGCTCTCGCCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGATAGCAGCTGAGAAGCGGGCACAGATAGAGGAGTTAGATGAGTAG 4497 0.4608 MFRLPSVLLSRRLHLRRLSSTPSRPPSLPLSHPIYLIWGSNTGVGKTLVSAGIAAASLLSSATTPSQFHYLKPLQTGFPADSDSRFVLDKLRQLSLLRNPRVHLSSSHRVLNVSPAVPETMPLACKEGHGPSELLCKTLYAWEEPVSPHLAAEREGLAVKDSVVLETLGECFEDVVERGAGRDRSEVLCVVETAGGVASPGPSGTLQCDLYRLNTVVLSFPVRPFRIPAVLVGDGRLGGISGTISAYESLMLRGYDVVAVAFEDHGLLNEGPLMSYMRNQVPVLVLPPIPKDLSNDLMEWFESSHHIFSNLKEIMLSAYLERIKRLQDMPREARDIIWWPFTQHKLIPEGGVTVIDSRCGENFSIFKVQKTEVIAPQFDACASWWTQGPDAIMQAALAREMGYAAARFGHVMFPENVHEPALNCAELLLQGVGKGWASRTYFSDNGSTAIEIALKMAFRKFSVDHGLIVDCLEDTTNERSAELMVLALHRSYHGDTLGAMEAQAPSSYTGFLQQPWYTGRGLFLDPPSVIMRNNTWNISIPEGYNWESLKGESITFASRDEVFHKGRDKSELATVYSSYISKVLSGFKGCYVVIQGAGGMHMVDPLFQRVLVNECRSRKIPVIFDEVFTGFWRLGVETAGGLIHCVPDIACFGKLLTGGIIPLAVTLATNAVFDSFIGDSKLKALLHGHSYSAHAMGCAAAVKSIQWFKDPCSNPNIAPEGRLLKELWDEKMVRRISSHPAIQRVVALGTLCALELKAEGTNAGILLELKGSSRENMGLILTCKLTQYLLVVRYGSLYARPLLEKLREDGIYMRPLARPNQPLFLSSVFTSFPAVFSKFACRGCIFKICCEFRLFGDVASRVSLLKPSADAISMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLGGRSPPKMIEGPDGRNLQLQFKSRLSLPLFTGGKVEGEQGAPIHVVLIDSNSGSVVTSGPESSVKLDVVVLEGDFNNEDDEDWTQDDFESHIVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGICESIRIREAKTVAFIVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNNAGIVSVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLYVYYPEDARNVGVIFNNIYELRGLISGEQFFSADSLTDSQKVYVDSLVKKAYDNWDQVVDYDGKSLVNGNQNNRSIASENELRVEAIDYGSGLDHQLQLPGLPVSVPSEQQINSGMPVGGYNDSMVSRYPTQSLISNSSTRSQFDSSLYLSNDQLISNSHQTPNTRNDHGPVGLALGPPQSSTSGFHAGSSSIQPSTLNPFDDWSHNRDRGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHGSMSAEDGYSFPTYMPSPNIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03537 1498 Hamap ATP-dependent dethiobiotin synthetase BioD [bioD]. 32 292 IPR004472 GO:0000287|GO:0004141|GO:0005524|GO:0009102
Spst3g03537 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 293 IPR027417 -
Spst3g03537 1498 Pfam Calmodulin binding protein central domain 1115 1180 IPR046830 -
Spst3g03537 1498 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 622 659 IPR005814 GO:0008483|GO:0030170
Spst3g03537 1498 Gene3D - 391 712 IPR015421 GO:0003824
Spst3g03537 1498 Pfam Calmodulin binding protein-like N-terminal domain 955 1102 IPR046831 -
Spst3g03537 1498 Gene3D - 25 316 IPR027417 -
Spst3g03537 1498 MobiDBLite consensus disorder prediction 1363 1378 - -
Spst3g03537 1498 FunFam Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase 391 712 - -
Spst3g03537 1498 CDD DTBS 33 262 - -
Spst3g03537 1498 SUPERFAMILY PLP-dependent transferases 338 817 IPR015424 -
Spst3g03537 1498 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 28 817 - -
Spst3g03537 1498 MobiDBLite consensus disorder prediction 1343 1378 - -
Spst3g03537 1498 Pfam Calmodulin binding protein C-terminal domain 1185 1247 IPR046829 -
Spst3g03537 1498 Pfam Aminotransferase class-III 594 770 IPR005814 GO:0008483|GO:0030170
Spst3g03537 1498 Pfam Aminotransferase class-III 404 508 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03537 Spst-Chr3 85328793 85353267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03537 864 1493 Calmodulin-binding Proteins AT5G57580 67.344 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03537 K19562 - gmx:100778549 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03537 3 85328793 85353267 Spst3g03537 3 85328793 85353267 ECH