Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03487 ATGGTGGTAACCTTGAAAGCATGTTGCACCGTGAGGCCAATGGAAGAAACATGGTGCGGACGCGTACCTTTGTCTGAATGGGATCAAACAGGTAAAGTAACCCACGTGCCCATAATCTACTTCTACCGTGCCCCACAAAACTGGCTCTCCCAAGACAAGACCATTGCTTCCACCTTGAAGGACTCTTTAAGCCGAGTCCTGGTGCCGTTTTATCCACTTGCTGGTCGTTTACATTGGATAAGCAATGGTCGTTTAGATCTTGATTGCAACGCCATGGGCATTCGGTTCATTGAAGCTGAGTCCTCATCAACTTTAGAAGATCTCGGTGACTTTTCACCGTCTTCAGAATACCACTACCTTGTCCCCACTGTTGACTACTACTCCCTCCCGATTCACGAGCTGCCGCTGGTTCTGGTTCAACTAACGAGGTTCAAATGTGGTGGCATTTGTATTGGCGTAACACTTTCGCACGCGGTTGTGGATGGACCAAGTGCATTACACTTCATGTGTGAGTGGGCAAGGCTTGCACGCGGCGATCCTTTGCAAACGGTGCCGTTCCTTGACCGAAAAGTGTTGCGGGCTGGGGAGCCTCCTTTGGTGCCACTAACAAAATGTCATGTTCACACGGAATTCGATGATCCTCCTTTGTTGCTGGGCCAAACTGAGAACATTGAGGAAAGGAAGAAGGAAACCACGATGGCTACCCTTAAAATAAGCAAAACTCAAGTTGAAACACTGAAAAAGAGAGCAAATGAGAGTTCGCACAGGCCTAGAAATGGTGTTGGTTATTCTCGTTACGAGAGTGTGGCTGGTCACATATGGAGAAGTGCATGCAAGGCAAGAGGGCACGCAGAGAACCAACCAACTATGCTTACTATTATCGTTGACACGAGGGGTCGCATGGAACCTCCTCTGCCAGAAGGGTACTTTGGCAATGCCTCTTTGGACACTGTTGCATGTAGTCTTGCGGGTGATTTGGTGTCCAAGCCTTTGGGGTATGCGTCAAGTAGAATAAGAGAGGCGATTGAAAGGGTGAATGATGAGTACGTGAGGTCGGGAATTGAGTTCTTGAAGAATCAGGAGAATTTGAGAAGGCTTCATCAAGATCTTCATGCAGAAGGGAGGGAGAAGGAGCCTTTCTATGGAAACCCCAATTTGTCTGTGGTTAGTTGGTTGACGTTGCCGATCTATGGCAATGATTTTGGGTGGGGGAAGGAGGTTTATATGACTCCAGCAACACATGACTTCGATGGAGATTTCGTGCTTCTTCCTGATTCAGGAGGGGATGGATCTTTGCTGGTGTTTTTAGGTCTGCAAGTGGTGCATATGGATGCATTTAAGAAGCATTTTTACGAGGACATTGCATAA 1368 0.4759 MVVTLKACCTVRPMEETWCGRVPLSEWDQTGKVTHVPIIYFYRAPQNWLSQDKTIASTLKDSLSRVLVPFYPLAGRLHWISNGRLDLDCNAMGIRFIEAESSSTLEDLGDFSPSSEYHYLVPTVDYYSLPIHELPLVLVQLTRFKCGGICIGVTLSHAVVDGPSALHFMCEWARLARGDPLQTVPFLDRKVLRAGEPPLVPLTKCHVHTEFDDPPLLLGQTENIEERKKETTMATLKISKTQVETLKKRANESSHRPRNGVGYSRYESVAGHIWRSACKARGHAENQPTMLTIIVDTRGRMEPPLPEGYFGNASLDTVACSLAGDLVSKPLGYASSRIREAIERVNDEYVRSGIEFLKNQENLRRLHQDLHAEGREKEPFYGNPNLSVVSWLTLPIYGNDFGWGKEVYMTPATHDFDGDFVLLPDSGGDGSLLVFLGLQVVHMDAFKKHFYEDIA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03487 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 450 - -
Spst3g03487 455 Pfam Transferase family 2 452 - -
Spst3g03487 455 FunFam Tryptamine hydroxycinnamoyl transferase 219 451 - -
Spst3g03487 455 Gene3D - 220 453 IPR023213 -
Spst3g03487 455 Gene3D - 1 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03487 Spst-Chr3 84666694 84668061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03487 1 452 Monolignol Biosynthesis Gene Families AT5G48930 38.326 8.86e-109 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03487 K13065 - gmx:100777532 738.028