Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03485 ATGTCAGTAACCTTGGAAGCCTCTTACATGGTGAAGCCTATGGAGCCAACACAAAGTGGACGTGTACCCTTATCTGAATGGGATCAAACAGGAACCATAAATCACAGCTTGATTGCAATGCCAGGTGCTCAGTTCGTTGAAGCTCAGTCCTCGTTAAGATTGGAAGATCTCGGTGACTTTTCATCTTCTTCAGGGTACCACTCCCTTGTTCCAAGTCTAGACTACACTCTCCCATTTCACGAGTTGCCCTTGCTTCTGGTTCAGTTAACCAAGTTCAAGTGTGGTGGCATTAGCATTTGCATAGCAATTTCTCATGTAGTTGTTGATGGACAAAGTGCGTTCCTCTTCACTTCTGAGTGGGCGAGGCTTGCACGCGGCGAGCCTCTGCAAACAGTGCCGTTTCTTGACAAGAAAGTGTTGCGTGCTGGGGAGCTTCCTTTGGTACCGTTAACAAAGTGTCGGCTTCACGCGGAGTTCGATGACCTTCCGTCATTGCTGGACAAAACGAAGATCACAGAGGAAAGGAAGAAGAAAACCAAAGTGGCTATTCTCAAACTAAGCAAAGTCCAAGTTGAGACGCTGAGAAAGACAGCAAATGAGAGTCATAGACCTAGGAACGGTCGTGGTTACACTCGTTACGAGAGTGTAACTGGCCACGTGTGGAGAAGTGCATGCAAGGCAAGAGGGAATAAAGAGGACCAACCATCCGCGCTTTGTGTTTGTGTTGACTCGAGGGGTCGCATGGAACCTCCTTTGACAAAAGAGTATTTTGGAAATGCCACTTTCGATGTGGTTGCTTCAAGCCTCGTGGGTGATTTGGTGTCAAAGCCTTTGGGGTATGCGTCAGGATCTTCATGGGATAGGGGTGAGAAGGAGCCTTTATATGGGGATCCTAATCTTAGTGTTGTTAGTTGGTTGACGTTGCCGATCTATGGGATTGATTTTGGGTGGGGGAAGGAGCTTCATATGAATCCAGGGCCATATGATTTTGATGGAGATTGTGTGCTTCTTCCTGGTCCCGATGGGGATGGATCTTTGTTGCTTACTTTATGTCTGCAAGAAGTTCATATGGATGCGTTTAAGAAGCATTTTTATGAGGACATTGAGTAA 1110 0.4667 MSVTLEASYMVKPMEPTQSGRVPLSEWDQTGTINHSLIAMPGAQFVEAQSSLRLEDLGDFSSSSGYHSLVPSLDYTLPFHELPLLLVQLTKFKCGGISICIAISHVVVDGQSAFLFTSEWARLARGEPLQTVPFLDKKVLRAGELPLVPLTKCRLHAEFDDLPSLLDKTKITEERKKKTKVAILKLSKVQVETLRKTANESHRPRNGRGYTRYESVTGHVWRSACKARGNKEDQPSALCVCVDSRGRMEPPLTKEYFGNATFDVVASSLVGDLVSKPLGYASGSSWDRGEKEPLYGDPNLSVVSWLTLPIYGIDFGWGKELHMNPGPYDFDGDCVLLPGPDGDGSLLLTLCLQEVHMDAFKKHFYEDIE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03485 369 Gene3D - 164 282 IPR023213 -
Spst3g03485 369 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 40 365 - -
Spst3g03485 369 Pfam Transferase family 296 366 - -
Spst3g03485 369 Pfam Transferase family 42 280 - -
Spst3g03485 369 Gene3D - 33 160 IPR023213 -
Spst3g03485 369 Gene3D - 283 367 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03485 Spst-Chr3 84649928 84651289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03485 42 366 Monolignol Biosynthesis Gene Families AT5G48930 35.714 8.07e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03485 K13065 - gmx:100777532 457.218