Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03473 ATGGAGAAGAGTAAAAAATTGCAGAAAAGCTACTTTGATGTGTTGGGTCTGTGCTGCTCCTCTGAAGTGCCACTCATCGAAAACATCTTGAAACCTCTTGAAGGAATCAAAGAGGTTTCTGTCATAGTTCCTTCGCGAACTGTCATTGTTCTCCACGACACTCTAGTCATTTCGCAGCTTCAAATTGTTAAGGCACTGAATCAAGCAAGGTTAGAGGCTAATATGAGAGTGTATGGGGAAGAAAAGCAGGAAAGGAGATGGCCAAGCCCTTATTCAATAGCATCTGGTGTCCTACTTTTGCTTTCCTTTCTCAAATTTGTGTATAATCCTCTCAAGTATTTGGCACTTGGTGCTGTTGCTGTGGGTATCTACCCAATCATCCTAAAGGCCATTGTCTCCATACGGAACCTTAGGCTTGATGTTAGCATTCTCATGATCATAGCAGTTATTGGAACAATTGCTATGGATGATTATTTGGAAGCCGGCACCATTGTTTTCCTCTTCTCAATTGCAGAATGGCTAGAATCAAGGGCAAGTCACAAGGCAAATGCAGCAATGTCATCTTTGATGAACCTAGCCCCTCAAAAAGCAGTCATAGCTGAAACAGGAGAGGTTGTGGATGCTGATGAGGTGAAAGTGAACACCATTTTAGCAGTTAAAGCAGGCGAGGTGATACCCATTGATGGAGTTGTTCTAGATGGAACCTGTGAAGTTGACGAGAAAACTTTGACTGGAGAATCATTCCCTGTGGCAAAACAAAAGGATTCGACTGTATGGGCTGGCACCATCAATTTAAATGGTTATATTAGTGTGAAAACTACTGCACTGGCTGAAGACTGTGTGGTGGCTAAAATGGCAAAGCTAGTGGAAGAAGCTCAAAACAGTAAAACCAGTGTTCAGAGTTTGATCGACAAGTTTGCCAAGTTTTATACCCCTGTTGCAACCTTTTGCGCTTACACCAGAGCAGCCACATCAGGTCTTCTCATCAAAGGGGGTCACCATCTTGAAACACTTGCAAAAATCAAGGTCATGGCCTTTGACAAAACGGGTACCATAACGAAGGGTGAATTTGTGGTCACGCAGTTTCAATCTCTTTCAGATGACATTGATTTGAACACATTGCTTTACTGGGTGTCAAGTGTAGAGAGCAAGTCAAGCCATCCACTGGCAGCAGCGATTGTGGATTATGGAAGGTCTCTCTCCGTTGAACCAGTGCCAGAAAAGGTGACAGAGTTTGAAAACTTTCCTGGGGAAGGAATATGTGGAAAAATTGAAGACAGAGTTATTTACATTGGAAACAAAAGAATTTCCGCAAGAGCCGGGTCAGAAACAGTTCCAATCTTACAAGGTGAAATTGCAAGAGGAAAGACCACTGGATACATATACTTGGGAGCAACCCCAGTTGGATTTTTCTCTCTTTCGGATGTTTGCAGATTAGGGGTTCAGGAAGCAATTGGGAAGTTGAAGTCATTGGGAATCAAAACAGCTATGCTCACTGGTGATGGTGAATCTGCCGCGATGCAAGCACAGGAGCAGCTGGGGCATTCTCTGGAGTTAGTCCATGCAGAACTTTTGCCAGAGGACAAGGTGAAAATCATCTCAGCTTTTAAGACGGAAGGTCCAACAGCCATGATTGGAGATGGTATAAACGATGCGCCGGCATTAGCTGCAGCTGATATTGGAATCTCAATGGGTATTTCAGGTTCTGCACTGGCAAGTGAGACAGGCAATATAATTCTTATGTCAAATGACATTAGGAAGATACCAGAAGCCATTAAACTTGCAAGAAAAGCACGTAGGAAAGTGATAGAAAACATTCTTTTGTCAATCAGTACTAAGGCTGCGATTATTGGTTTGGCCATTGGTGGTTATCCATTGGTTTGGGCAGCAGTTGTTGCTGATGTTGGAACCTATCCTCACAAGTGTGCCTCCTCCCAGAGAAGCTCCTCAACATGTCCTCCAGCCTGCTCTTCAAATTCAAGTTTAGGTGCAATTGTTAACCATTGTAAGACCATGAAGGGTCATGATCAATGTAAAGGAAGTGATGAATTCCATGAACATGATCACTGTCATCATGGAGGATGTGACAAGAATCAGGATGGAATCCACAAGCATGATACGGAAAACCACTTGAATTCACGCAATTTGATTATAAATGAAGAAGATAATCATGCAGTTGCAGCAAACAGGCATGGCCATTGTGCAGGACATAAGGCTCATGGGACAAAACACTGCCACCACCAACATGTTGACATGGTTGCTCATGGTGAAGTTTTGCATAGTTCTCCTGGCCATCTTCATCTCTCACGTCAAAAGGAGGGCCAGCAACACGCCAATAACCATTGCCACTCTATCCCTTGTTGTGAAAACCTGAAAGACCCTGAATCCAGAAATGTTTTACATTCCAATCAAGACATGCATCATAAAAAACCAGGTTGTAGTTCTGACCTTGAGAAGCATGGGACAGGTGAAATTTCCATTGATATCATCATTGAGCACGTTGAACTAGCCCCAATGCATGGTTGTTCAAGTTTGGCAGAGAAAGAAAAAGGTTCCTGCTGTGAAGGCTGCTCAGAGACATGCGAGAATTTGCCTGCTGTGTGTGGCTGTGAGTGTTCAAACGAGAGAGAAGATAGTGCATGTTGCAGAAATGAGTGCTCTTCAAAAGAATGCAAGGAATCTCCCATTATGCATGTTTGTCTTGGTTTGGACAAGAGAGAATTTGGTGGATGTTGTAAGAGCTATATGAAGGAATGCTGCGGCAAACTTGGACACTCAAGAGCTGGTTTTGTAGGAGGTTTATCAGAAATTATGACAGAATCGGTGTAG 2829 0.4323 MEKSKKLQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVLHDTLVISQLQIVKALNQARLEANMRVYGEEKQERRWPSPYSIASGVLLLLSFLKFVYNPLKYLALGAVAVGIYPIILKAIVSIRNLRLDVSILMIIAVIGTIAMDDYLEAGTIVFLFSIAEWLESRASHKANAAMSSLMNLAPQKAVIAETGEVVDADEVKVNTILAVKAGEVIPIDGVVLDGTCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNSKTSVQSLIDKFAKFYTPVATFCAYTRAATSGLLIKGGHHLETLAKIKVMAFDKTGTITKGEFVVTQFQSLSDDIDLNTLLYWVSSVESKSSHPLAAAIVDYGRSLSVEPVPEKVTEFENFPGEGICGKIEDRVIYIGNKRISARAGSETVPILQGEIARGKTTGYIYLGATPVGFFSLSDVCRLGVQEAIGKLKSLGIKTAMLTGDGESAAMQAQEQLGHSLELVHAELLPEDKVKIISAFKTEGPTAMIGDGINDAPALAAADIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARKARRKVIENILLSISTKAAIIGLAIGGYPLVWAAVVADVGTYPHKCASSQRSSSTCPPACSSNSSLGAIVNHCKTMKGHDQCKGSDEFHEHDHCHHGGCDKNQDGIHKHDTENHLNSRNLIINEEDNHAVAANRHGHCAGHKAHGTKHCHHQHVDMVAHGEVLHSSPGHLHLSRQKEGQQHANNHCHSIPCCENLKDPESRNVLHSNQDMHHKKPGCSSDLEKHGTGEISIDIIIEHVELAPMHGCSSLAEKEKGSCCEGCSETCENLPAVCGCECSNEREDSACCRNECSSKECKESPIMHVCLGLDKREFGGCCKSYMKECCGKLGHSRAGFVGGLSEIMTESV 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03473 942 FunFam Copper-transporting ATPase 1, putative 179 293 - -
Spst3g03473 942 PRINTS P-type cation-transporting ATPase superfamily signature 545 564 - -
Spst3g03473 942 PRINTS P-type cation-transporting ATPase superfamily signature 239 253 - -
Spst3g03473 942 PRINTS P-type cation-transporting ATPase superfamily signature 491 501 - -
Spst3g03473 942 PRINTS P-type cation-transporting ATPase superfamily signature 569 581 - -
Spst3g03473 942 ProSitePatterns Hypothetical cof family signature 2. 545 567 - -
Spst3g03473 942 Gene3D - 3 77 - -
Spst3g03473 942 SUPERFAMILY Calcium ATPase, transduction domain A 204 289 IPR008250 -
Spst3g03473 942 CDD P-type_ATPase_HM 93 637 - -
Spst3g03473 942 Pfam E1-E2 ATPase 200 324 - -
Spst3g03473 942 Gene3D - 178 293 - -
Spst3g03473 942 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 311 637 - -
Spst3g03473 942 Gene3D - 336 596 IPR023214 -
Spst3g03473 942 ProSitePatterns E1-E2 ATPases phosphorylation site. 347 353 IPR018303 -
Spst3g03473 942 ProSiteProfiles Heavy-metal-associated domain profile. 8 74 IPR006121 GO:0046872
Spst3g03473 942 SFLD Haloacid Dehalogenase 328 597 - -
Spst3g03473 942 FunFam Putative cadmium/zinc-transporting ATPase 3 4 77 - -
Spst3g03473 942 NCBIfam HAD-IC family P-type ATPase 164 316 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g03473 942 NCBIfam HAD-IC family P-type ATPase 318 625 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g03473 942 SFLD p-type atpase 328 597 IPR044492 -
Spst3g03473 942 SUPERFAMILY HMA, heavy metal-associated domain 6 73 IPR036163 GO:0046872
Spst3g03473 942 FunFam Putative cadmium/zinc-transporting ATPase 3 356 477 - -
Spst3g03473 942 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 327 IPR023298 -
Spst3g03473 942 Pfam haloacid dehalogenase-like hydrolase 341 559 - -
Spst3g03473 942 SUPERFAMILY HAD-like 344 637 IPR036412 -
Spst3g03473 942 Gene3D - 356 477 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03473 Spst-Chr3 84515630 84525413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03473 4 940 Primary Pumps ATPases AT4G30110 50.942 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03473 K01534 - gmx:100817567 1208.74