Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03466 ATGTCAGTAACCTTCCAAGCTTGTTACATGGTGAAGCCTATGGAGCCAACACAGCGTGGACGTGTACCCTTATCTGAATGGGATCAAATAGGCACCATAAATCACGTTCCCACAATATACTTTTACCGTCCCTCCAAACATTTTGATCTCTCCCCAAACTATACCAATATTGCTTCCACCTTGAAGGACTCATTAAGCCGAGTCCTGGTGCCGTTTTATCCTCTAGCTGGTCGTTTGTACTGGATAAAAAATGGTCGTTTAGAGCTTGATTGCAATGCCATGGGTGCTCAGTTCATTGAAGCTCAGTCCTCATTAAGTTTGGAAGATCTCGGTGACTTTTCACCCTCTTCAGAGTACCACTACCTAGTTCCAACTGTAGACTACACTCTCCCAATTCACGAGTTGCCCTTGGTTCTGGTTCAGTTAACCAACTTCAAGTGTGGTGGCATTAGCATTAGCATAGCAATTTCTCATGCACTTGCTGATGGACCAAGTGCAATGCACTTCACTTCTGAGTGGGCGAGGCTTTCACGCGGCGAGCCTCTGCAAACGACACCGTTTATTGACAAGAAAGTGTTCCGTGCTGGGGAGCCTCCTTTGGCACCGCTAACAAAATGTCGTGTTTACTCGGAGTTCGATGACCTTCCGTTGTTGCTGGACCAAACAAAGAGGACAGAGGAAAGGAAGAAGAAAACCAAAGTGGCTATTCTCAAACTAAGCAAAGTCCAAGTTGAGACGCTGAGAAAGACAGCAAATGAGAGTCATAGACCTACGAAAAGTCGTGGTTACACTCGTTACGAAAGTGTAACTGGTCACGTGTGGAGAAGTGCATGTAAGGCAAGAGGGCATAAAGAGGACCAACCAACCGCGCTTTGTGTTTGTGTTGATTCGAGGGGTCGCATGGAACCTCCTTTGCCAAAAGAGTATTTTGGAAATGCCACTTTCGATGTGGTTGCTTCAAGTCTGGTGGGTGATTTGGTGTCAAAGCCGTTGGGGTATGCGTCGAGTAGAATAAGAGAGGCGATTGAGAGGGTGAATGATGAGTACGTGAGGTCGGGGATTGAGTTCTTGAAGAATCAAGATGATTTGAGCAGGTTTCAGTATCCTTATGTGATAGGGAGTGAGAAGGGGCTTTTACATGGGGACCCTAATCTTAGTGTTGTTAGTTGGTTGACGTTGCCAATCTATGGGGTTGATTTTGGGTGGGGGAAGGAGGTTTATATGGGTCCAGGGACACATGATTTTGACGGAGATTCTCTGCTTCTTCCTGGTCCTGATGGAGATGGATCTTTGTTGCTTGCTTTATGTCTACAGGAAGTGCATATGGATGCGTTTAAGAAGCATTTTTATGAGGACATTGAGTAA 1365 0.4579 MSVTFQACYMVKPMEPTQRGRVPLSEWDQIGTINHVPTIYFYRPSKHFDLSPNYTNIASTLKDSLSRVLVPFYPLAGRLYWIKNGRLELDCNAMGAQFIEAQSSLSLEDLGDFSPSSEYHYLVPTVDYTLPIHELPLVLVQLTNFKCGGISISIAISHALADGPSAMHFTSEWARLSRGEPLQTTPFIDKKVFRAGEPPLAPLTKCRVYSEFDDLPLLLDQTKRTEERKKKTKVAILKLSKVQVETLRKTANESHRPTKSRGYTRYESVTGHVWRSACKARGHKEDQPTALCVCVDSRGRMEPPLPKEYFGNATFDVVASSLVGDLVSKPLGYASSRIREAIERVNDEYVRSGIEFLKNQDDLSRFQYPYVIGSEKGLLHGDPNLSVVSWLTLPIYGVDFGWGKEVYMGPGTHDFDGDSLLLPGPDGDGSLLLALCLQEVHMDAFKKHFYEDIE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03466 454 Gene3D - 1 210 IPR023213 -
Spst3g03466 454 FunFam Tryptamine hydroxycinnamoyl transferase 220 450 - -
Spst3g03466 454 Pfam Transferase family 1 451 - -
Spst3g03466 454 Gene3D - 220 452 IPR023213 -
Spst3g03466 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03466 Spst-Chr3 84433451 84434815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03466 1 451 Monolignol Biosynthesis Gene Families AT5G48930 38.987 1.60e-110 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03466 K13065 - gmx:100777007 696.812