Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03410 ATGTTTCTTAAGAGTTTAACTTTTACCTTCCGCCCATGGAATTTTCCAAGCTCTGCCAATGCTAGAAGTATTGTTTTCAAGAAACAAATGTTTTGGGTCTTGTCCTTTTCACAAAACAACAGTTCTGACTGGAAAGGGATGGGGCTTGTTTTTGCCTTGATGCTGCAGCTCTGCATAACTGGCCTTGCAGTGACAGCTCAAGAATCCAAAGGGTCCATTATATCTCCATCTTCAACATTGCTTCTTGTCTTTCCTATATCAGAAACACTAAGTCCTATTTATCACGGGGAGGGAAGCGAGGCACCAAACTTACCACCAGATGGAGATGGGTTTATTTTATCCCCATCTCCGGCGAACATACATGTGTATCATTCCCCTAGCTTCCCGACAGTACCAAACGGGCCATTTTTTCAGCCTCCAAAGATACTACCACCTCCTACAGCAGCTCCATCCCCTTACAAGATTAAAGACATTGAATCATCCAAATCTCCAGATCCAAGCACTATAGCATTACCACCACCATTTGAGCTTGTTCCCTCACCATCAGTAGTTCAAGGGACCAAGCCACCATCTATAAAAACAAGTCCACCTCAAATTAATGCACCTGCGGTTAGACCTCCTGTCTCCTCACCAACTGCTCCAGAAACAGTTGAAAGATCTTCTGGCAGATCACCAAAAACTTCACCTGTCAGCCAACCAATTGAACATGGAAATCTGGCACCTAATTCCGATAGTAGGCATGCAAATAAGAGTCACCTTGCAGAGCCATTTTCACCAGCTCCAAGTGCAACACCTTCTGCTAATATGCCCAAAAATTCACCAGGCAGCCAACCAACTGAACATGCAACTTTTCCTCCGAAAGAGGATACGAATAAAGAACCAGTTACACCACCTTCAAGTGCATTTCCATTTAAACCACCATTGGTCCATCCAATTTTTCCAGTAGCATCTCCATCAAAATTACCAGAGCCTGTAGCCTCTCCCACTCCGTTGAGAAACATCAATTGGAAGAAAGGTGGAGCACCAGTTGTTGCTCCTTTGTCCAGAAATCCAAAGCCACTTCCAGCTGTAATACACTCCCCTGCTCAAGCTCCCGCAGCACAAAAGTCAATGCAATCGCATCATGCTGCCGAGCCATTGATCTCATCTCCTAAATCTCCTTCGAATAAAGAACATCGTTCTCCCGCATTGTCATCCTCATTTCACAAACATCCTCATACAAAGGAGATAATCATCAACTCTGCTCCTGCATCATCATATATGGTTTCCCCACCCATTTCAAAACACGAAGATTCTTCAGTTTTCCCATTCTCTTCCCCTATTCATTCACACATGGACCAAGTTTCACCTGCTCGTTCTCCATCAACCAAACTCGCATCTCACCGAACTGGAAAAGCTCCATATGAGTCTTCTTCGAAGAGACCTAATATGCCTTTCCTGCCTCCAGTTCAAGCACTGCCACCACCACCTCCCAATGAAGATTGTTTATCAACTGTCTGCACAGAACCTTATACAAATTCTCCCCCTGGAGAACCTTGCAGATGCGTATGGCCCATGCGAGTTGGTCTTCGCCTTAGTGTTTCACTTTATACCTTCTTCCCTTTGGTTTCAGAACTAGCTTCTGAAATTGCCGCTGGGGTTTTCATGAAACAAAGTCAAGTTCGCATTATGGGAGCAAATGCAGTAAACCAACAACCTGAGAAAACTGTTGTCCTTATTGATTTGGTTCCACGTGGGGAACAGTTTGATAATACTACAGCCTTTCTGACTTCTGAGAGATTTTGGCACGAAAAGGTCCTTATCAAAGCTTTCTACTTTGGATCCTACGACGTGTTATACGTGAGTTATCCAGGTTTACCTCCCTCTCCTCCTTTACCTCCTTCAAGCCTAAACTCGTTCAGTGGTGTTCCATATCCCACTGATGGCAATAATGGAAGGACAATAAAGCCCTTTGGGGTTGACATACAGACGAGACAACATGAAGGTGGACTTAGCAGAAGCATAATTGCAATTATTGCCGTTTCAGTATCTTTAGCAGCTGTCATATGTGCTGCTGCTGCTGCTTGGGTCATGTTCAAGTTCAGAGATCACGTTAGTCAGCCAGCAGCAACCGTACGACAGCTTTCGTCTCCTTCACTTACCAAAGAACCAGGTACTGCTGGATCACATAGAGGTGGGGGAGTTGGTTCGGTTTCCACATCATTTCGTTCTAGCATTGCTGCTTACACAGGATCTGCTAAGACTTACACTATGAATGACATTGTGAAAGCTACTAATGATTTCCATGCTTCAAGAATACTTGGAGAGGGCGGTTCTGGGCGTGTGTATAGTGGTATCCAGGAAGATGGGACGAAAGTGGCGATAAAGGTTTTAAAGAGGGAGGATCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAGATGCTCAGCCGTCTTCACCATAGAAATTTGGTCAAGTTAATTGGTTTATGTATTGAAGACAGCTTTCGCTGCTTGGTTTATGAACTTGTTCCAAATGGAAGCGTGGAATCTCATTTACATGGGGTTGACAGGGAAAACAGCCCCCTCGATTGGAGTGCCCGGTTGAAGATAGCTCTTGGTGCAGCTCGTGGTTTAGCTTATTTGCATGAAGATTCAAGTCCCCGTGTTATACATAGAGATTTCAAATCTAGCAACATATTGTTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACAGCAACTGATGAGAACAAACACATATCAACACGCGTCATGGGAACTTTCGGGTATGTGGCGCCGGAGTATGCAATGACTGGACATCTTCTTGTTAAAAGTGATGTGTACAGCTATGGTGTTGTTCTTCTTGAACTTTTGACTGGAAGAAAACCTGTAGACATGTCACAAGCTCCTGGTCAAGAGAATCTTATTGCTTGGGCTCGTCCACATCTCACAAGTAAAGAAGGATGTGAAACAATGATAGACCCGTCTCTAGGAGCTGATGTGCCTTTTGATAGTGTGGCTAAGGTTGCGGCCATTTCTTCAATGTGTGTGCAACCAGAGGTATCAAACCGTCCCTTCATGGGTGAGGTTGTGCAGGCTCTAAAACTTGTATGTAATGAATGTGATGAAGCAAAAGAAGAAGCAGGTTCAAGAAGGTGTAGCCTGGAGGATTTATCTGTTGATTTAGATCTTGAAATAAGCACTGTTTCTGGTCACCTAACAGATAATCTCCAAAGCCAATTCTCAGCTACTAACTTTGATTCTGGGGTTGATATTGAAAGAGGCTTAGCAGCATCGGAACTGTGCAGTTCATCAGCAAGATTTACCAGGGTGGAGTTTGGATTGTTCAGAAGCAACTCTTATTCAGGTCCTCTGAGAACTGGAAGAAGCTGGCGGTTGTGGCAGATAATTAGAAGTCTTTCTAGAGGCAGTGTCAGTGAACATGGAACTATGTTAAAGTTTCCTGTGCCCGATTCGTGGTATCCCACACTCTCCGTCTTCACCTTCGCCATCGGCCTCGTCTTGACCGCCTCTTTCTTCATATATGAAGCAACCTCTTCTAGGAAAAGTCGTTCACTTGTCCAGGAGCTGACAACTGGAGCGGTGGCATCAATCTTCTTGGGTTTTGGGTCCTTGTTCCTCTTAATTGCGTGCGGCGTTTATGTCTAA 3666 0.443 MFLKSLTFTFRPWNFPSSANARSIVFKKQMFWVLSFSQNNSSDWKGMGLVFALMLQLCITGLAVTAQESKGSIISPSSTLLLVFPISETLSPIYHGEGSEAPNLPPDGDGFILSPSPANIHVYHSPSFPTVPNGPFFQPPKILPPPTAAPSPYKIKDIESSKSPDPSTIALPPPFELVPSPSVVQGTKPPSIKTSPPQINAPAVRPPVSSPTAPETVERSSGRSPKTSPVSQPIEHGNLAPNSDSRHANKSHLAEPFSPAPSATPSANMPKNSPGSQPTEHATFPPKEDTNKEPVTPPSSAFPFKPPLVHPIFPVASPSKLPEPVASPTPLRNINWKKGGAPVVAPLSRNPKPLPAVIHSPAQAPAAQKSMQSHHAAEPLISSPKSPSNKEHRSPALSSSFHKHPHTKEIIINSAPASSYMVSPPISKHEDSSVFPFSSPIHSHMDQVSPARSPSTKLASHRTGKAPYESSSKRPNMPFLPPVQALPPPPPNEDCLSTVCTEPYTNSPPGEPCRCVWPMRVGLRLSVSLYTFFPLVSELASEIAAGVFMKQSQVRIMGANAVNQQPEKTVVLIDLVPRGEQFDNTTAFLTSERFWHEKVLIKAFYFGSYDVLYVSYPGLPPSPPLPPSSLNSFSGVPYPTDGNNGRTIKPFGVDIQTRQHEGGLSRSIIAIIAVSVSLAAVICAAAAAWVMFKFRDHVSQPAATVRQLSSPSLTKEPGTAGSHRGGGVGSVSTSFRSSIAAYTGSAKTYTMNDIVKATNDFHASRILGEGGSGRVYSGIQEDGTKVAIKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGLCIEDSFRCLVYELVPNGSVESHLHGVDRENSPLDWSARLKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLARTATDENKHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLIAWARPHLTSKEGCETMIDPSLGADVPFDSVAKVAAISSMCVQPEVSNRPFMGEVVQALKLVCNECDEAKEEAGSRRCSLEDLSVDLDLEISTVSGHLTDNLQSQFSATNFDSGVDIERGLAASELCSSSARFTRVEFGLFRSNSYSGPLRTGRSWRLWQIIRSLSRGSVSEHGTMLKFPVPDSWYPTLSVFTFAIGLVLTASFFIYEATSSRKSRSLVQELTTGAVASIFLGFGSLFLLIACGVYV 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03410 1221 MobiDBLite consensus disorder prediction 365 395 - -
Spst3g03410 1221 Pfam Protein tyrosine and serine/threonine kinase 763 1033 IPR001245 GO:0004672|GO:0006468
Spst3g03410 1221 MobiDBLite consensus disorder prediction 213 247 - -
Spst3g03410 1221 FunFam receptor-like serine/threonine-protein kinase ALE2 734 836 - -
Spst3g03410 1221 MobiDBLite consensus disorder prediction 705 730 - -
Spst3g03410 1221 SUPERFAMILY Protein kinase-like (PK-like) 742 1033 IPR011009 -
Spst3g03410 1221 MobiDBLite consensus disorder prediction 432 470 - -
Spst3g03410 1221 Gene3D Phosphorylase Kinase; domain 1 733 836 - -
Spst3g03410 1221 MobiDBLite consensus disorder prediction 432 476 - -
Spst3g03410 1221 CDD STKc_IRAK 767 1034 - -
Spst3g03410 1221 MobiDBLite consensus disorder prediction 261 284 - -
Spst3g03410 1221 MobiDBLite consensus disorder prediction 134 151 - -
Spst3g03410 1221 PANTHER OS01G0750732 PROTEIN 487 1062 - -
Spst3g03410 1221 MobiDBLite consensus disorder prediction 184 198 - -
Spst3g03410 1221 ProSiteProfiles Protein kinase domain profile. 761 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03410 1221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 883 895 IPR008271 GO:0004672|GO:0006468
Spst3g03410 1221 FunFam Receptor-like serine/threonine-protein kinase ALE2 837 1050 - -
Spst3g03410 1221 MobiDBLite consensus disorder prediction 299 325 - -
Spst3g03410 1221 MobiDBLite consensus disorder prediction 134 405 - -
Spst3g03410 1221 Gene3D Transferase(Phosphotransferase) domain 1 837 1057 - -
Spst3g03410 1221 ProSitePatterns Protein kinases ATP-binding region signature. 767 789 IPR017441 GO:0005524
Spst3g03410 1221 Pfam Oligosaccharyltransferase subunit 5 1154 1221 IPR007915 GO:0006487|GO:0034998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03410 Spst-Chr3 83906075 83918224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03410 246 1149 Receptor kinase-like Gene Family AT5G56890 53.446 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Spst3g03410 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03410 - - gmx:100816296 1369.37