Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03385 ATGGAGGAAATATCTTCGAGTGTTGCAGTACCTTTTACACTTGGTGTTGGAAATTTGATTCAAAAGGAGTCTGCAGTGACAACTCACATGGAGATAACTGGGCTGAAGCTTATGGCAAATACAGCAGCGGCTGCTTTGATGTTAAATCCTGCAGTGGATTGTTGTCAATCATTTTCTGTTGGAAGTGAAAGCCATGCAGATGTTAGTCTGCAGCACCAGATTAAGGTATCTGCAGAGGTAAAGGAGAATCAAGTTGGAGCTGCCCTTGTCTCAGAAATGGTTATTGAATGTGAGAGTAATTGGGTTTTAAATGAAAGCAATCATAAAGCTAGAAAGGAAGATGAACTAATGTTAGCTGTTGATTTTCAGTGTCTACATAGTTCAAGCTCTCAGTCTGTGGCTAATGGCCAAAGTGATCCTTACAGGGAGGAAGCAGTGCCGTTGATGACTAGTTATTCTGAAATAGAATCACCAATCATCACAAAGGTTAATGATGATGTTCATGGCAAGTCTGGAGTAAACGAGCCGTGTCCATCAATGAAGCCAGTGGATAACACAGTTTCTATTGCAATGGATATTATTAGTGAGGATCAAAGTGGATCAGATGAGTCTGATCCTAAATCAGCCGCTGTGCTTATTGACCAGTTGCCTGGGGAGAATAAAACATGGAGAACAAGCAACCAGAGTGCTTTGGAATCGAACAGTGGCTCTCTCTGGGGTTATTCATCAATTTGTGGAATGAGACCGGAGATGGAAGATGTTATCTCTGTTCAGCCTCAACTTTTTCAAGTTCCTTCACATATGCTGATGAATGACCATGTAAATGAGAACGAACAACAGTCACTAGCCCACTTTTTTGCTGTCTACGATGGACATGGGGGCCCTCAGGTTGCTAACTACTGCCGCGAACGTCTTCATTCAGTATTGATTGAGGAGATAGAGGCTACACAATCAAGTTTAGCTGAAACAAATGGGAGATATGATTGGCAGGACCATTGGCAGAAAGCATTCATCAATTGTTTTCAGAGAGTAGATGACGAGGTTGGAGGAACTGGTGCAAGTAATAGTGGAAACAATAGTGGTGGATCTGAGTCTAATATTGAACCTGTTGCTGCTGAGACTGCTGGTTCCACTGCAGTGGTCGCGATTTTGAGTCAAACCCACATAATAGTTGCAAATTGTGGAGATTCAAGAACTGTCTTATACCGTGGAAAAGAAGCCATGCCATTGTCTTCTGACCACAAACCAAATAGAGAGGACGAGAGGGCAAGGATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATACCGAGTTCTTGGTGTCTTGGCAATGTCAAGGTCGATAGGTGACAGATACCTGAAACCATGGATAATTCCAGAACCTGAAGTCAATATTGTGCGTAGAGAGAAAAATGACGAGTGTCTGATTCTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCCTGCGAGGTTGCTAGGAAAAGAATCCTTCTTTGGCACAAAAAGTTTGGTGAAAACGGAGCAACAGGACATGGCCAAGGAGCTGATCCTGCAGCTCAGTCTGCTGCAGAGTATCTAACAAAGCTTGCCATCCACAGGGGAAGCCAAGATAACATCTCTGTAATTGTGATAGACTTGAAGGCTCAGAGAAAAATTAAGAGAAAGCCTTAA 1686 0.4276 MEEISSSVAVPFTLGVGNLIQKESAVTTHMEITGLKLMANTAAAALMLNPAVDCCQSFSVGSESHADVSLQHQIKVSAEVKENQVGAALVSEMVIECESNWVLNESNHKARKEDELMLAVDFQCLHSSSSQSVANGQSDPYREEAVPLMTSYSEIESPIITKVNDDVHGKSGVNEPCPSMKPVDNTVSIAMDIISEDQSGSDESDPKSAAVLIDQLPGENKTWRTSNQSALESNSGSLWGYSSICGMRPEMEDVISVQPQLFQVPSHMLMNDHVNENEQQSLAHFFAVYDGHGGPQVANYCRERLHSVLIEEIEATQSSLAETNGRYDWQDHWQKAFINCFQRVDDEVGGTGASNSGNNSGGSESNIEPVAAETAGSTAVVAILSQTHIIVANCGDSRTVLYRGKEAMPLSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVRREKNDECLILASDGLWDVMTNEEACEVARKRILLWHKKFGENGATGHGQGADPAAQSAAEYLTKLAIHRGSQDNISVIVIDLKAQRKIKRKP 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03385 561 Pfam Protein phosphatase 2C 259 544 IPR001932 -
Spst3g03385 561 SMART PP2C_SIG_2 269 551 IPR001932 -
Spst3g03385 561 SMART PP2C_4 228 549 IPR001932 -
Spst3g03385 561 PANTHER PROTEIN PHOSPHATASE 214 551 IPR015655 GO:0004722|GO:0006470
Spst3g03385 561 FunFam Protein phosphatase 2C 16 226 561 - -
Spst3g03385 561 CDD PP2Cc 240 551 IPR001932 -
Spst3g03385 561 ProSitePatterns PPM-type phosphatase domain signature. 285 293 IPR000222 GO:0043169
Spst3g03385 561 ProSiteProfiles PPM-type phosphatase domain profile. 238 551 IPR001932 -
Spst3g03385 561 Gene3D - 225 561 IPR036457 -
Spst3g03385 561 SUPERFAMILY PP2C-like 233 552 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03385 Spst-Chr3 83529117 83531573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03385 171 561 PP2C-type Phosphatase Gene Family AT4G26080 54.250 1.36e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03385 K14497 - gmx:100789207 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03385 3 83529117 83531573 Spst3g03385 3 83529117 83531573 ECH
Spst3g03385 3 83529117 83531573 Spst9g02847 9 62651825 62654669 PCT