Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03378 ATGTACTTGTTAACAGAAAAGAAAATTACATTAAATGATAACTACCCAAGCACAAACAACCCTTCCGTCCCTATCATATCACCGTCCTCACTGCCCCTGAGAGTCAATTCCTGGCAGCAGTTGCATTCTATGACACCTTATCCTCGCATTATGTCTGCACCAGTAAATATTATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGAACAAGCATGGATTGATGGAGAAGTTTCTAAAATCAATGGTGAAGAAGTCCATGTTCGCAGCACAGCTGGGAAAACAGTTGCAAAAAACATCTCAAAGGTTCTTCCCAAGGATAATGAAGCCCCTCCTGGAGGTGTAGATGACATGACAAAATTGTCTTACTTGCATGAACCTGGTGTTCTGCACAATTTGGCAGCTAGATATGAACTCAATGAAATCTATACATATACTGGAAATATCCTGATTGCAATAAATCCTTTTCAAAGGTTACCACACCTATATGATACTCACATGATGGAACAATACAAAGGAGCTCTATTTGGAGAATTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGGGCAATGATTAATGAGGGGAAAAGCAACTCAATCCTGGTTAGTGGTGAGAGTGGGGCTGGAAAGACAGAGACAACAAAAATGCTTATGCGGTATCTTGCATATCTTGGGGGTCGATCTGGAGTAGAAGGGCGAACAGTTGAACAACAAGTTTTAGAATCGAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACTGTTAGAAACAACAACTCAAGTCGTTTTGGTAAATTTGTTGAGATACAATTTGACAACAAGGGAAGAATCTCGGGGGCAGCTATACGAACATATTTGCTTGAAAGGTCCCGTGTCTGTCAAATTTCAGATCCTGAAAGAAATTACCATTGCTTTTACCTTCTCTGTGCAGCCCCAGCTGAGGTAAACTCGTTTCATTACTTAAATCAATCCAACTGCTATGCTCTGGATGGAGTGGATGATGCTGAGGAATATCTTGCAACTCGAAGGGCAATGGATGTTGTCGGAATAACAATTTTGCATCTTGGAAACATTGAATTTGCGAAAGGAGAGGAGATTGACTCTTCTGTCATTAAGGATGAGAAGTCTAGGTTCCATCTTAATGTTACCGCTGAACTTCTTAAGTGTGATTGTAAGAGCTTGGAAGATGCGCTGATCAAGCGTGTAATGGTAACGCCGGAGGAGGTTATTACAAGAACCCTTGATCCTGTTGCAGCTCTTGGTAGCAGGGATGCATTAGCTAAAACTGTTTATTCCCGTTTGTTTGATTGGCTAGTTGAGAAGATTAACAATTCAATTGGACAAGATCCAAATTCAAAATCTATTATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGCTGCAACAACATTTTAATCAGCACGTCTTTAAAATGGAACAAGAAGAATACACAAAAGAAGAGATTAATTGGAGTTACATAGAATTTGTTGACAACCAAGATGTTTTGGATCTAATAGAGAAGGTAGTGATGATTTTAATATTCAATCTTTTGCAGAAACCTGGAGGAATAATTGCACTTCTTGATGAAGCCTGTATGTTTCCAAAGTCTACACATGAAACATTTGCTCAGAAATTGTACCAGACATTCAAAAACAACAAGCGCTTCATCAAACCTAAACTTTCTCGGACTAGTTTTACCATATCCCATTATGCGGGGGAGGTGACATATCTAGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTGGCAGAACATCAGGACTTGCTCATAGCCTCAAAATGCTCATTTGTGGCTGGTCTGTTCCCCCCTTCTCCAGAGGAGTCTTCAAAATCATCAAAGTTCTCATCAATAGGATCTCGCTTCAAGCTACAACTTCAATCTTTGATGGAGACCCTGAATTCAACAGAACCTCACTATATCCGATGTGTGAAGCCAAATAATGTTCTCAAGCCTGCTATTTTTGAAAATGTCAACATTATCCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACCAGACGAACCTTCTATGAATTTCTAAACCGGTTTGGTGTTCTTGCCCCTGAAGTTCTCGACGGAAACTATGATGACAAGGTTGCATGCCAAATGATCCTTGACAAAATGGGTATGAAAGGCTATCAGATAGGAAAGACAAAGGTTTTCCTAAGAGCTGGCCAGATGGCTGAACTGGATGCAAGAAGAGCAGAGGTTCTTGGAAATGCTGCTAGAGTCATACAGAGGCAAATACGAACCCATATTGCACGCAAGGAATTCATTGAATTGCGCCGAGCTGCAATTTGTCTGCAATCTAATTTGCGAGGAATATTGTCCCGGAAACTTTATGAGCAGTTGCGGCGAGAAGCAGCAGCTGTAAAAATACAAAAGAACTTTAAAGGATACATTTCCAGGAATTCATACTTAAAAGCACGATCATCTGCAATTGTATTACAGACAGGTTTAAGGGCTATGAAAGCTCGTGATGAATTTAGATTTAGAAAGCAAACAAAAGCTGCAATTTACGTCCAGGCTTATTTGCGTCGGCTTATTGCATATTCATATTATAAACGATTGCAAAAGGCTTCCATTGCTACTCAATGTGGATGGAGGAGAAGGGTTGCTAGAAAGGAACTCCGAATGCTTAAAATGGCTGCAAGAGAAACAGGCGCTCTCAAAGAAGCTAAGGACAAACTAGAAAAACGTGTTGAAGAACTTACTTGGCGTTTGCAAATCGAGAAGCGATTGAGAACTGATTTGGAAGAAGAAAAGGCACAAGAAATTGCCAAGTTACAGGATGCTTTACATGCAATGCAAATACAAATAGAAGAAGCAAATGCCAGGGTCATCAAAGAGCGTGAGGCAGCAAGAAAGGCCATCGAAGAAGCACCTCCAGTTATTAAGGAGACTCCTGTTTTAATTCAGGATACCGAAAAGATTAATTCTTTATTGGCTGAAGTCAATAGTTTGAAGGAAGCACTGCTTTTGGAAAAAGAGGCTAAAGAAGAGGCAAGAAAAGCTCAGGCTGAGACTGAAGCTAGAAATAAAGAGATGGTTAAAAAAGTTGAAGATTCTGACCGCAAAGTGTATCAACTTCAAGAATTGGTTCAGAGATTGGAGGAAAAAATTTCCAATGCAGAGTCAGAAAATCAAGTTCTTCGCCAGCAAGCACTGGCTGTATCACCTACTGGAAAAGCTCTGTCTGCAAGACCAAGGACAGTTATTATTCAGAGGACACCTGAAAATGGAAGTGCTCTAAATGGTGAAGCAAAAATTGAATCGGATATGACTCTTGCTGTATCCAATGTGCGTGAGCCTGAATCTGAGGGAAAACCACAAAAATCTCTCAATGAGAAGCAGCAAGAAAACCAAGACTTATTGATCAAGTGCATATCTCAAGATTTGGGATTTTCTGGGGGCAAACCTGTGGCTGCATGTGTCATATATAAATGCCTTCTTCACTGGAGGTCATTTGAAGTTGAAAGGACAAGTGTATTTGATCGAATCATTCAAACAATAGCTTCAGCTGTTGAGGCCCAGGATAATACTGATGTATTGGCCTATTGGTTGTCTAATACATCTACTTTGTTGTTGCTACTCCAACGCACTCTAAAAGCAACAGGAGCTGCTAGCTTAACACCACAGCGGCGGAGAACAGCATCATCCTCTCTGTTTGGAAGAATGTCTCAAGGGCTTAGGGCATCTCCCCAAAGTGCTGCATTGTCATTTCTAAATGGTCGAGGTCTTAATAGACTTGATGATTTACGACAAGTAGAAGCAAAATATCCAGCACTGCTGTTTAAGCAGCAGCTTACTGCCTTCCTTGAAAAAATATATGGAATGATAAGAGACAACCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGTATTCAGGCTCCAAGAACCTCACGGCAAAGTTTAGTTAAAGGACGCTCACATGCAAATGCAGTTGCTCAGCAAGCTTTAATTGCTCACTGGCAAAGTATTGTAAAAAGCTTAAACAATTGTCTGAAGATAATGAAAGCAAACTATGCGCCTCCTTTTTTGGTCCGAAAAGTGTTCACCCAAATATTCTCATTCATCAATGTTCAATTATTCAATAGTCTTTTGTTGCGTCGGGAGTGTTGTTCGTTTAGCAATGGGGAGTATGTAAAAACAGGTCTTGCTGAATTAGAGCACTGGTGTGTTGAGGCGACAGAGGAGTACACTGGCTCTGCTTGGGATGAACTGAAACATATCAGGCAGGCTGTTGGATTCCTGGTGATACATCAAAAACCCAAAAAGTCCCTGAATGAAATTACGAAGGAGCTTTGCCCTGTTCTCAGTATACAACAGTTATACAGGATAAGTACAATGTACTGGGATGACAAATATGGCACTCACAGTGTGTCTTCAGACGTTATTACAAACATGAGAGCTATGATGTCCGAGGACTCTAATAATGCTGTCAGCACTTCTTTCCTATTAGATGATGACTCCAGCATTCCGTTTTCGGTGGATGACATTTCCAAATCAATGCAACAAGTAGAAGTAGCGGACGTGGATCCTCCTCCACTTATACGTAAAGGCTGGTGGCCAGGCATTCTGTCACACCTGCCAAGAGCTACTTGGAGGACAACTGTTATGTTGAATATCAAAGAAGATTTCACCTTGAAACGAAAATTTCGTAAACACTTATTAAAGGTATTTGATATTGGTTGGTACTTGAAGCATATCATATATGGGAAGTATGAAGATGGAAATGAAGCAATGCACAACTAA 4866 0.4028 MYLLTEKKITLNDNYPSTNNPSVPIISPSSLPLRVNSWQQLHSMTPYPRIMSAPVNIIVGSHVWIEDPEQAWIDGEVSKINGEEVHVRSTAGKTVAKNISKVLPKDNEAPPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGALFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEVNSFHYLNQSNCYALDGVDDAEEYLATRRAMDVVGITILHLGNIEFAKGEEIDSSVIKDEKSRFHLNVTAELLKCDCKSLEDALIKRVMVTPEEVITRTLDPVAALGSRDALAKTVYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKVVMILIFNLLQKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLIASKCSFVAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENVNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDDKVACQMILDKMGMKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARVIQRQIRTHIARKEFIELRRAAICLQSNLRGILSRKLYEQLRREAAAVKIQKNFKGYISRNSYLKARSSAIVLQTGLRAMKARDEFRFRKQTKAAIYVQAYLRRLIAYSYYKRLQKASIATQCGWRRRVARKELRMLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQEIAKLQDALHAMQIQIEEANARVIKEREAARKAIEEAPPVIKETPVLIQDTEKINSLLAEVNSLKEALLLEKEAKEEARKAQAETEARNKEMVKKVEDSDRKVYQLQELVQRLEEKISNAESENQVLRQQALAVSPTGKALSARPRTVIIQRTPENGSALNGEAKIESDMTLAVSNVREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLLLLQRTLKATGAASLTPQRRRTASSSLFGRMSQGLRASPQSAALSFLNGRGLNRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQSLVKGRSHANAVAQQALIAHWQSIVKSLNNCLKIMKANYAPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEHWCVEATEEYTGSAWDELKHIRQAVGFLVIHQKPKKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSDVITNMRAMMSEDSNNAVSTSFLLDDDSSIPFSVDDISKSMQQVEVADVDPPPLIRKGWWPGILSHLPRATWRTTVMLNIKEDFTLKRKFRKHLLKVFDIGWYLKHIIYGKYEDGNEAMHN 1621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03378 1621 Gene3D - 824 876 - -
Spst3g03378 1621 Gene3D - 774 823 - -
Spst3g03378 1621 ProSiteProfiles Myosin motor domain profile. 112 771 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 58 107 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 Gene3D Kinesin motor domain 115 701 IPR036961 -
Spst3g03378 1621 PRINTS Myosin heavy chain signature 510 538 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 PRINTS Myosin heavy chain signature 142 161 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 PRINTS Myosin heavy chain signature 457 485 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 PRINTS Myosin heavy chain signature 199 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 PRINTS Myosin heavy chain signature 246 273 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 ProSiteProfiles IQ motif profile. 845 874 IPR000048 GO:0005515
Spst3g03378 1621 FunFam Myosin heavy chain 302 348 - -
Spst3g03378 1621 SMART DIL_2 1387 1494 IPR002710 -
Spst3g03378 1621 ProSiteProfiles IQ motif profile. 870 899 IPR000048 GO:0005515
Spst3g03378 1621 CDD MYSc_Myo11 126 759 IPR036018 -
Spst3g03378 1621 Gene3D Myosin VI head, motor domain, U50 subdomain 352 640 - -
Spst3g03378 1621 Gene3D - 302 351 - -
Spst3g03378 1621 Coils Coil 1007 1090 - -
Spst3g03378 1621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 824 IPR027417 -
Spst3g03378 1621 ProSiteProfiles IQ motif profile. 822 848 IPR000048 GO:0005515
Spst3g03378 1621 Gene3D - 467 662 - -
Spst3g03378 1621 PANTHER MYOSIN 108 1500 - -
Spst3g03378 1621 Pfam IQ calmodulin-binding motif 776 794 IPR000048 GO:0005515
Spst3g03378 1621 Pfam IQ calmodulin-binding motif 824 842 IPR000048 GO:0005515
Spst3g03378 1621 Pfam IQ calmodulin-binding motif 798 817 IPR000048 GO:0005515
Spst3g03378 1621 SMART MYSc_2a 106 772 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 Coils Coil 916 996 - -
Spst3g03378 1621 FunFam unconventional myosin-Va 873 920 - -
Spst3g03378 1621 Pfam Myosin head (motor domain) 114 759 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 Pfam DIL domain 1388 1491 IPR002710 -
Spst3g03378 1621 FunFam unconventional myosin-Va 776 824 - -
Spst3g03378 1621 FunFam unconventional myosin-Va 825 872 - -
Spst3g03378 1621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 824 922 IPR027417 -
Spst3g03378 1621 CDD MyosinXI_CBD 1152 1535 IPR037975 GO:0007015
Spst3g03378 1621 SMART iq_5 892 914 IPR000048 GO:0005515
Spst3g03378 1621 SMART iq_5 796 818 IPR000048 GO:0005515
Spst3g03378 1621 SMART iq_5 844 866 IPR000048 GO:0005515
Spst3g03378 1621 SMART iq_5 773 795 IPR000048 GO:0005515
Spst3g03378 1621 SMART iq_5 821 843 IPR000048 GO:0005515
Spst3g03378 1621 SMART iq_5 869 891 IPR000048 GO:0005515
Spst3g03378 1621 Pfam Myosin N-terminal SH3-like domain 59 95 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst3g03378 1621 ProSiteProfiles IQ motif profile. 776 800 IPR000048 GO:0005515
Spst3g03378 1621 ProSiteProfiles IQ motif profile. 797 826 IPR000048 GO:0005515
Spst3g03378 1621 FunFam Myosin XI D 706 769 - -
Spst3g03378 1621 ProSiteProfiles Dilute domain profile. 1201 1512 IPR002710 -
Spst3g03378 1621 Gene3D - 706 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03378 Spst-Chr3 83466030 83481116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03378 117 1564 Myosins gene family AT5G20490 81.088 0.0 2444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03378 K10357 - gmx:100777802 2749.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03378 3 83466030 83481116 Spst3g03378 3 83466030 83481116 ECH