Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03371 ATGCTTACGTGCATAGCTCGTCCCAAGAAACCTGATGAGTCAGATCCGAACAACGCGACGAGCGCCGCTAAATCGCAAGCCATTAAATCCCTCACTTCTCAGATAAGGGATATGGCGTTGAAGGCTTCAGGAGCGTACAAGCATTGCGCTCCTTGCACGGGGCCAGCGGCGCAGGTGGGAGTGCGGAGTAACACCGAGTCGGACGCGGACTCCGACCGGTTCCGGTGGTCGTACCGGCGAACAGGGAGTTCGAGCTCGACGACGACTCGGACGTGGGGGAAGGAGTTGGAGGCCCGGCTGAAGGGAATATCGAGCGGGGAAGGGACGCCAAACTCCGCGAGTGGACGGCGGGTGGAGCCCGTGGTGCTTTTCGTGGAAGAGAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGTGTTTTGATTACGTTCGTGTCGTTGCCACGTGGCGGGAACGATCTCAAACGCATACGGTTCAGTCGAGAGATGTTCAATAAATGGCAAGCTCAAAGGTGGTGGGCAGACAACTACGATAAAGTTATGGAACTTTACAATGTTCAAAGGTTTAGCCGCCAAGCATTCCCTCTTCCGACGCCACCAAGATCTGAAGATGAGAGCTCAAAGCTTGAATCAGTAGAAGACAGCCCTGTAACACCTCCACTGACCAGGGAACGGCTACCTCGTAATATTTACCGTCCAACAGGGATGGGAATGGGAATGGGATACTCATCCTCGGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTTCTATGATTCAAATTGTATGAATTCTACCCCAAAAGTATCCACCATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCGGGTGATTTATCAATCAGCAATGCTAGTGATTTTGAAACTGAGTGGGTTGAGCAGGATGAACCTGGGGTTTACATTACAATCAGAGCATTACCAGGTGGTGCAAGGGAGCTCAAACGTGTCAGGTTCAGCCGAGAAAAATTTGGAGAGATGCATGCTAGATTGTGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1104 0.5181 MLTCIARPKKPDESDPNNATSAAKSQAIKSLTSQIRDMALKASGAYKHCAPCTGPAAQVGVRSNTESDADSDRFRWSYRRTGSSSSTTTRTWGKELEARLKGISSGEGTPNSASGRRVEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWADNYDKVMELYNVQRFSRQAFPLPTPPRSEDESSKLESVEDSPVTPPLTRERLPRNIYRPTGMGMGMGYSSSDSFDHQSMQSRHFYDSNCMNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASDFETEWVEQDEPGVYITIRALPGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03371 367 Pfam Transcription factor BRX N-terminal domain 20 52 IPR027988 -
Spst3g03371 367 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 367 IPR044532 -
Spst3g03371 367 MobiDBLite consensus disorder prediction 1 27 - -
Spst3g03371 367 ProSiteProfiles BRX domain profile. 312 367 IPR013591 -
Spst3g03371 367 MobiDBLite consensus disorder prediction 196 224 - -
Spst3g03371 367 Pfam Transcription factor regulating root and shoot growth via Pin3 311 366 IPR013591 -
Spst3g03371 367 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Spst3g03371 367 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03371 Spst-Chr3 83414865 83419774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03371 1 367 Major Intrinsic Protein MIP AT1G31880 44.444 2.57e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03371 - - gmx:100794109 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03371 3 83414865 83419774 Spst3g03371 3 83414865 83419774 ECH
Spst3g03371 3 83414865 83419774 Spst9g02839 9 62589820 62599471 PCT