Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03357 ATGAGTGAAAGAATATTAGTACTTCTGCTGCTTGTTTTGAATTATTTGTTGGTTGCAGAAGGAGAAACAGCTGATGAGGATTTGGCCACACTTATGTCTCTTGCGAGTACCTGGAAGAACACCCCCCCTGATTGGGTGGGTTCGGATCCTTGTGAAGAGTGGGAAGGAATCAAGTGCAAGAATGCACATGTTACATCAATAACACTAGCAAGTACTGGTTTGGCTGGTCAGCTATCTGGAGATATTGGATCACTATCTGAATTGGAGACTTTGGATCTATCTTACAACAAGGAGTTGACTGGACCACTTCCACAATCCATGGGGGAGTTGACGAAGCTGTCAACCTTAATTCTTGTTGGTTGTAACTTCAATGGTCCTATTCCAGACACTATAGGAAATCTTCAAGAGCTCCTCTACTTGTCTTTAAATTCCAATAGCTTTAGTGGACCAATTCCGCCTTCTATTGGTAATCTATCAAAGCTTTATTGGTTAGATTTAGCAGAAAATGAACTTCGAGGGAGCATCCCGGTATCCAGTGGCGACATATCTGGTCTTGATAAGTTACACCATGCAAAACATTTTCATCTTGGGAAGAATAAACTCTCAGGCACTATCCATCCTCAACTTTTTAGCTCGGAAATGGCTTTGATTCATTTGCTTTTGGAGAGTAATGAACTCGAAGGCCACATTCCATCTACACTTGCACTAGTCAAGAGTCTGGAGGTTGTGCGTTTAGATAATAATTCATTTAATGGATCTGTGCCCTCAAACATCAAGAATCTTACGAATGTTCGAGATCTGGTCCCTGCCAGACCTTACTGGAATGAATGCCCTCAACTTCCTGTAAATTTCAAAGCATTTAGCTGTGATAGTTATGTTGCAACTGTCGTTAGTCGTTACTATCTTACACAGTTAGCTCTTGTTTTTCATGGCAGAAAGATGCAACGAACACAACTTCAAGGACAGGTTCCTACTTCTTTATTTGAACTTGCAAATTTACAGACTGTGGTGCTAAAAGACAACAAAATAAATGGAACCTTGGATGTCGGCTCCTCCTACAGCAACCGGCTGCGACTTGTTGATTTGGAGACTAATTCAATTGAAATCTTTAAGCAAAATGATGCAGTTCCAAATGTCAAGATAATGTCAGCTTCCTTTTCGGACTTGGATAACATAACATACTACTCAACCCTTGAGGAGTATCTCATGCGGTCTTTTAAGTCTCATTTTGAACCTGTGGATTCGGTTTTGTTGAGCCATCCACGTAAGGATTCAACTCAGTATCTCAAACTGAATTTACAAGTCTTCCCATCAGGACAAGATCATTTCAATAGAACAGGGACTTTAAGCATTGGTTTTATGCTAAGCAACCAGACTTTCAAGCCTCCTACAGATTTTGGACCATTTTATTTTCTTGCAGATAGATATGAACACTTTGGGAACTATGAAGGATTGACTGAATCGGGTAAAACTGTAAACATTGGAATCATAATTGGGGCAGCAGTTGGTGGTTTGGTCTTGCTAGTGTTATTAGTCTTAGCTGGTCTTTATGCTTTCCGCCAGAAGAAAAGGGCCGAAAAAGCGATTGGGCAAAGCAATCCTTTTAGACGCTGGGATACGGTTGATGACAAGAGTGCATCCCCTCAGTTGAAAGAAGCAAAGATGTTCTCTTTTGAAGACCTTAAAAAATACACCAAAAATTTTTCTCCAGCCAATGACATTGGATCTGGAGGTTTTGGGAAGGTTTACAAGGGAACCCTTCCCAATGGACAAGTGATAGCAATAAAAAGAGCTCAAAAAGACTCTATGCAGGGAAAGCTTGAGTTTAAAGCGGAGATTGAACTTCTATCAAGGGTTCACCATAAGAATCTTGTCAGCCTTTTGGGCTTCTGCTTTGACCAAGGAGAGCAAATGCTGGTTTATGAGTATGTTCTAAATGGAAGTTTAAAGGAGGCTCTCTCAGGGAAGTCAGGAATAAGATTAGACTGGATTAGAAGGTTAAAAGTTGCCCTTGGTACTGCCCGGGGTTTGGCTTATCTCCACGAACTTGTTAATCCTCCCATCATACATAGGGACATCAAATCAAACAATATTTTGCTGGATGACCGCCTAAATGCCAAAGTTGCTGATTTTGGTCTCTCCAAGTCTATGGTTGATTCTGAAAAAGATCATGTTACCACTCAGGTTAAGGGAACAATGGGTTACTTGGATCCAGAGTATTATATGTCTCAACAACTGACAGAGAAGAGTGACGTCTATAGCTTTGGAGTACTGATGTTGGAGCTGATATCTGCAAGAAGGCCATTGGAACGAGGGAAGTATATTGTGAAAGAGTTTAGAAATGCACTGGATAGGACAAAAGGCTTATACGGTCTTCATGAATATATTGACCCAGCCATTGGATCATCATCCACAACACTGGTCGGTTTTGACAAGTTTGTGAATTTGACCTTGAAATGTGTTGAAGAGTCGGGTGAAGGAAGGCCTAAAATGAGTGAAGTGGTAAGCGAGATCGAGAACATATTGAAGTCAGCTGGTGCCAACCCTACTGAGGAATCACCCTCCATCTCTTCTAGCTATGAAGAGGTAAGCCGAGGGAGTTCCAGCCATCCTTATAACAGCAACGACACCTTTGATTTGAGTGCAGGGTTTCCATATCCAAAAGTAGACGCTAGCTAA 2679 0.4128 MSERILVLLLLVLNYLLVAEGETADEDLATLMSLASTWKNTPPDWVGSDPCEEWEGIKCKNAHVTSITLASTGLAGQLSGDIGSLSELETLDLSYNKELTGPLPQSMGELTKLSTLILVGCNFNGPIPDTIGNLQELLYLSLNSNSFSGPIPPSIGNLSKLYWLDLAENELRGSIPVSSGDISGLDKLHHAKHFHLGKNKLSGTIHPQLFSSEMALIHLLLESNELEGHIPSTLALVKSLEVVRLDNNSFNGSVPSNIKNLTNVRDLVPARPYWNECPQLPVNFKAFSCDSYVATVVSRYYLTQLALVFHGRKMQRTQLQGQVPTSLFELANLQTVVLKDNKINGTLDVGSSYSNRLRLVDLETNSIEIFKQNDAVPNVKIMSASFSDLDNITYYSTLEEYLMRSFKSHFEPVDSVLLSHPRKDSTQYLKLNLQVFPSGQDHFNRTGTLSIGFMLSNQTFKPPTDFGPFYFLADRYEHFGNYEGLTESGKTVNIGIIIGAAVGGLVLLVLLVLAGLYAFRQKKRAEKAIGQSNPFRRWDTVDDKSASPQLKEAKMFSFEDLKKYTKNFSPANDIGSGGFGKVYKGTLPNGQVIAIKRAQKDSMQGKLEFKAEIELLSRVHHKNLVSLLGFCFDQGEQMLVYEYVLNGSLKEALSGKSGIRLDWIRRLKVALGTARGLAYLHELVNPPIIHRDIKSNNILLDDRLNAKVADFGLSKSMVDSEKDHVTTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVLMLELISARRPLERGKYIVKEFRNALDRTKGLYGLHEYIDPAIGSSSTTLVGFDKFVNLTLKCVEESGEGRPKMSEVVSEIENILKSAGANPTEESPSISSSYEEVSRGSSSHPYNSNDTFDLSAGFPYPKVDAS 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03357 892 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Spst3g03357 892 Gene3D Ribonuclease Inhibitor 181 269 IPR032675 -
Spst3g03357 892 Gene3D Ribonuclease Inhibitor 270 420 IPR032675 -
Spst3g03357 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Spst3g03357 892 MobiDBLite consensus disorder prediction 846 880 - -
Spst3g03357 892 MobiDBLite consensus disorder prediction 842 892 - -
Spst3g03357 892 Gene3D Phosphorylase Kinase; domain 1 538 643 - -
Spst3g03357 892 FunFam Leucine-rich repeat protein kinase family protein 181 278 - -
Spst3g03357 892 Pfam Protein tyrosine and serine/threonine kinase 572 836 IPR001245 GO:0004672|GO:0006468
Spst3g03357 892 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Spst3g03357 892 FunFam Leucine-rich repeat family protein 26 180 - -
Spst3g03357 892 Gene3D Transferase(Phosphotransferase) domain 1 645 863 - -
Spst3g03357 892 PANTHER RECEPTOR-LIKE PROTEIN 55 41 842 - -
Spst3g03357 892 SMART serkin_6 568 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03357 892 ProSiteProfiles Protein kinase domain profile. 568 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03357 892 SUPERFAMILY L domain-like 33 267 - -
Spst3g03357 892 FunFam Leucine-rich repeat protein kinase family protein 534 643 - -
Spst3g03357 892 SUPERFAMILY Protein kinase-like (PK-like) 554 871 IPR011009 -
Spst3g03357 892 CDD STKc_IRAK 574 841 - -
Spst3g03357 892 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 644 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03357 Spst-Chr3 83309557 83315365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03357 1 890 Receptor kinase-like Gene Family AT5G49760 49.435 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Spst3g03357 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03357 - - gmx:100811702 1256.51