Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03349 ATGGATCCTATCAATCTCACCAACAACCCTAATCTTGCTTCCAGACAGCGTTTACGCTGGACGAATGAGCTACACGAACGCTTTGTTGATGCAGTCGCACAACTTGGTGGTCCAGATCCAAAATACCTTCCTGACTCCTCATTGGATGGGCAAAAAGGCGACAAGAAAGAAACAGGGGATACTCTTTCCAGTATAGATGGTTCACCTGGGATGCAGATTACTGAAGCGCTAAAGCTTCAAATGGAGGTGCAGAAGCGACTGCATGAGCAATTGGAGGTGCAGAGACAGCTACAATTGCGGATAGAAGCCCAAGGTAAATACTTGAGGAAGATTATTGAAGAGCAACAGAGACTTGGTGGGGTTCTTTCAGAAGTATCTGACTCTGGGGTTACGGCTCCAGTTCCAGGAGATATGTGCCAACAAGAACCTGATGATAAGACTGATCCAGCAACCCCTGCCCCAACCTCTGAGTGCCTTCTGGAAAAGGCTTCCAAAGAGCATGCCCCAGATAAGAGTCTTTCAATGGATGAATCTTTTTCATCCCACCATGAACCAATGACACCAGATTCCTGTTGTCACGTTGGTTCCCCTACTGACAATCCTAAAGGGGAGAGATCTACAAAAAAGCAACGGCTTAACATGGAGGCAGCATATTCTGAGCCAGAATTGGTGCTTCCGCTCGAGATTTCAAGCATGTCATCATATCACCGACCAAATGCAATTTTCGTTTGCCAAGAACAATTTGGTCCTTCATTGGGTATGTCTGCAGGAAGTGTTAAGGCGTTGGAGCAGGATGGTAACAGTAGTCTGTGA 813 0.4649 MDPINLTNNPNLASRQRLRWTNELHERFVDAVAQLGGPDPKYLPDSSLDGQKGDKKETGDTLSSIDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLRKIIEEQQRLGGVLSEVSDSGVTAPVPGDMCQQEPDDKTDPATPAPTSECLLEKASKEHAPDKSLSMDESFSSHHEPMTPDSCCHVGSPTDNPKGERSTKKQRLNMEAAYSEPELVLPLEISSMSSYHRPNAIFVCQEQFGPSLGMSAGSVKALEQDGNSSL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03349 270 NCBIfam myb-like DNA-binding domain, SHAQKYF class 16 39 IPR006447 GO:0003677
Spst3g03349 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 39 IPR044848 GO:0003700
Spst3g03349 270 Coils Coil 74 94 - -
Spst3g03349 270 Gene3D - 14 112 - -
Spst3g03349 270 Pfam MYB-CC type transfactor, LHEQLE motif 71 117 IPR025756 -
Spst3g03349 270 MobiDBLite consensus disorder prediction 34 70 - -
Spst3g03349 270 MobiDBLite consensus disorder prediction 160 178 - -
Spst3g03349 270 MobiDBLite consensus disorder prediction 126 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03349 Spst-Chr3 83239045 83241480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03349 41 243 G2-like Transcription Factor Family AT2G01060 61.353 2.27e-73 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03349 - - hbr:110654981 343.199