Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03331 ATGGGGGACGTTAGATTATACCATCCAAATGAAGGTGTGTTGTCCATGGAGTGCCCCGAAAACCACTGCTATAGAAGCAGCAGCGTGTGTGAGATAGAAGAGGACGGAGACGACAACGAGACTCAGCACCATGTAAGGCCTATAGCCACTAGTCACAGAGAAAAACAAGAAGAAGATGAAGAAGACTGTGTTTATGTTGCAGTGGGTAAGAGCAACACAAGCCTGTATGCTCTCTCATGGACACTTAACAACTTGGTTACTCAATCTACCATCATTTATCTCATTCATGTATTCCCTGAGATCAAACACATTCCAAATCCATTGGGAATAGGAATGGTTCCAAGGGAACAAGTGAGTGCTGAGCAGGTGGAGAGTTATATTGACCAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAATTCCTACAATCATGCTCTACGTCCAAGGTTAAGGTAGAAACCATCCTGATTGAGAGTGACTTAGTTGCAAAGGCTATCCTCGACCTGATTCCCATTCTTCAAATAAGAAGCCTAGTGATTGGAGCCAACAAATTCCATCTAAGAAAATCAAAATCAAGGAAAGGGAATAGTGTTGCTGATCAGATTCTGCAGAATTCACCAGAAAGTTGCAAGGTGAGAATAATATGTGGAGGGAAGGAAGTAAATGAGCAGATGATGTCACCCCCTACTCGCACCTCTCTTAATGATACATCCATAACTAGCCAAAAGAAAGAAGATCATGATGATACGGTTTCATGCATTTGTTTCATACCCAAGTTTAAATGA 786 0.4224 MGDVRLYHPNEGVLSMECPENHCYRSSSVCEIEEDGDDNETQHHVRPIATSHREKQEEDEEDCVYVAVGKSNTSLYALSWTLNNLVTQSTIIYLIHVFPEIKHIPNPLGIGMVPREQVSAEQVESYIDQERGKRRELLQKFLQSCSTSKVKVETILIESDLVAKAILDLIPILQIRSLVIGANKFHLRKSKSRKGNSVADQILQNSPESCKVRIICGGKEVNEQMMSPPTRTSLNDTSITSQKKEDHDDTVSCICFIPKFK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03331 261 Pfam Universal stress protein family 65 208 IPR006016 -
Spst3g03331 261 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 207 - -
Spst3g03331 261 Gene3D HUPs 41 227 IPR014729 -
Spst3g03331 261 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 22 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03331 Spst-Chr3 83136493 83137607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03331 67 216 Plant U-box Gene Family AT5G57035 31.579 2.09e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03331 - - vra:106768035 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03331 3 83136493 83137607 Spst6g01318 6 12182198 12192632 PCT