Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03326 ATGGATGAACCATTGAGGTTGCTAAAAGTCATTGTAGTGCAAGGGAAAAGATTAGTGATCCGGGATTTCAAGAGCAGTGACCCTTATGTTGTTGTCAAGCTGGGGAATCAGACAGCAAAGACCAGGGTCATCCATTGTTCCTTGAATCCAGTTTGGAATGAAGAGCTGAATTTCACTCTGACAGAACCTTTGGGACTTCTGAATTTGGAAGTGTTTGACAAAGATTTTTTGAAGGCTGATGACAAGATGGGGAATAGTTACTTGAACCTTCAACCATTGATGTCTGCATCTAGATTAAGAGATATTTTAAAGGTGTCCTCTGCCTCTGGTGAGACAGCATTAAGGAAAGTGACACCAGATAGTGAAAATTGTCTTGCCCGTGAAAGCAGTATCAATTGTGTTAATGGTGAAGTTGTTCAAAATGTTTGGTTGAGGCTTCGTGGGGTTGAATCTGGGGAGCTACAATTGACAGTCAAATCAGTAGTTGGCGATGACGATGAAGAATGGGAAGTGGGTCCCTCCGTTAGGGCCTAA 534 0.4251 MDEPLRLLKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTRVIHCSLNPVWNEELNFTLTEPLGLLNLEVFDKDFLKADDKMGNSYLNLQPLMSASRLRDILKVSSASGETALRKVTPDSENCLARESSINCVNGEVVQNVWLRLRGVESGELQLTVKSVVGDDDEEWEVGPSVRA 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03326 177 CDD C2_ArfGAP 7 152 - -
Spst3g03326 177 Gene3D C2 domain 1 118 IPR035892 -
Spst3g03326 177 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Spst3g03326 177 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 161 IPR044562 -
Spst3g03326 177 SMART C2_3c 7 102 IPR000008 -
Spst3g03326 177 Pfam C2 domain 8 100 IPR000008 -
Spst3g03326 177 PRINTS C2 domain signature 46 59 IPR000008 -
Spst3g03326 177 PRINTS C2 domain signature 22 34 IPR000008 -
Spst3g03326 177 PRINTS C2 domain signature 67 75 IPR000008 -
Spst3g03326 177 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 158 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03326 Spst-Chr3 83111481 83113852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03326 1 159 C2H2 Transcription Factor Family AT4G21160 40.252 3.70e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03326 - - pvu:PHAVU_003G087500g 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03326 3 83111481 83113852 Spst6g01312 6 12147984 12149536 PCT