Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03317 ATGGGTAATGTGAACGTGCGTCGTTCTGAAGAAGCAGAAACAACAGAAGAAGAAGAAGAAGCTTTTGCTGATGAGAACGCCATGCCTCACTCTCCTCCCGGCATCTCTCCCTTTGTATTCGCTCCCCAGCTTCCTGTGGTTCCGCTACCAAGACCTGAGGAGATGCATATTCCCAGTTATTCCTCGATGGAGACAACTTCAGGGTATGAAGATATGTTCAGTGAACTGGGAATTCCTACTATGATTATTTGGAGTTATGGTGGAAAGGAAGTAGCTGTGGAGGGATCGTGGGATAATTGGAGAAAAAGAATGCTCCTGCAGAGATCAGGGAAAGACTTTGCAATAATGAAGGTATTGCCATCTGGGGTTTACCAGTATAGATTTATCGTGGATGGACGGAAGAGATATACACCAGACTCGCCGTGGGCCCAAGATGATGCTGGGAATGCTTACAACATCTTGGACTTACAGGATTATATTCCTGAAGACATCGGAAGCATTTCTAGTTTTGATCCTCCTCAGTCACCAGAGTCAAGTTATGATAACTCACAGCTTAGTTCTGAAGATTATGCGAAGGAGCCACCATTTGTTCCTCCACTTTTGCAAATGACACTGCTAAATGTGCCTGCAACAAATATGGAAATCCAACCTCCTATGTCAAGACCTCAACATGCAGTGCTGAATCATCTTTACACGCAAAAAGGAAAGAGCAGTCCTACCGTTGTTGGTCTTGGTACAACTCATCGATTTTTAGCCAAATACGTCACTGTGGTATTGTACAAGTCGTTGTGA 792 0.4432 MGNVNVRRSEEAETTEEEEEAFADENAMPHSPPGISPFVFAPQLPVVPLPRPEEMHIPSYSSMETTSGYEDMFSELGIPTMIIWSYGGKEVAVEGSWDNWRKRMLLQRSGKDFAIMKVLPSGVYQYRFIVDGRKRYTPDSPWAQDDAGNAYNILDLQDYIPEDIGSISSFDPPQSPESSYDNSQLSSEDYAKEPPFVPPLLQMTLLNVPATNMEIQPPMSRPQHAVLNHLYTQKGKSSPTVVGLGTTHRFLAKYVTVVLYKSL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03317 263 SUPERFAMILY E set domains 78 163 IPR014756 -
Spst3g03317 263 MobiDBLite consensus disorder prediction 168 188 - -
Spst3g03317 263 MobiDBLite consensus disorder prediction 1 31 - -
Spst3g03317 263 CDD E_set_AMPKbeta_like_N 79 155 - -
Spst3g03317 263 Gene3D - 167 263 - -
Spst3g03317 263 SUPERFAMILY AMPKBI-like 161 262 IPR037256 -
Spst3g03317 263 Gene3D Immunoglobulins 74 160 IPR013783 -
Spst3g03317 263 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 5 263 IPR043554 -
Spst3g03317 263 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 191 261 IPR006828 GO:0005515
Spst3g03317 263 SMART AMPKBI_2 173 263 IPR006828 GO:0005515
Spst3g03317 263 MobiDBLite consensus disorder prediction 167 188 - -
Spst3g03317 263 Pfam Glycogen recognition site of AMP-activated protein kinase 78 157 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03317 Spst-Chr3 83025293 83028446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03317 K07199 - gmx:100805688 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03317 3 83025293 83028446 Spst6g01292 6 11895990 11898541 PCT