Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03307 ATGGGACCCAGATATCTTATGTATGGAGACATATCTACTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGAGAAGTCTATGTGACACAAAAGTTTCTAGAGAATTTTTGCGGGGATCAGGTTCGTTTCTTAGCAAGATCATTTGCAGTACCGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCCTATGGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCTGTTCTTCAATTGATGGGTGCACTCTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTACGTCTGCTTCACACCTGTGGCTTACCTGTTGAAGATGTAGACTTCATAAATTCTGACGGGAAGACAATGAACAAACTGTTACTGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCTGAGAAGTTAGCCCTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATCAGGAAGATTACACTGCGTGGGTGTGTGATCAAGATGCATATGCATGCAGTGGTCAGAAATGCTCTGCCCAATCATTATTATTTATGCACGAGAACTGGTCTAAAACTTCCTTGCTATCGAAGTTAAAAGATCTTGCTGAAAGAAGAAAGTTGACAGACTTGACAATTGGCCCAGTCCTCACAGTTACGACTGATTCTATGCTTGAACATGTCAATAAGTTGCTTGAGATACCAGGATCAAAGCTGCTCTTCGGAGGTCGACCTTTGGAGGATCATTCAATTCCGTCTATTTATGGTGCTATTAAACCAACAGCTGTTTATGTTCCTCTTGAGGAAATTATGAAGGATAACAATTTTGAACTTGTGACAAAAGAAATATTCGGACCCTTCCAGATTATTACCGATTACAAAAATAGTCAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTGACAGCTGCTGTAGTTTCGAATGATCCTTTATTTGTGCAGGAAGTCATTGGCAAGACGGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGGACAACCGGAGCTCCACAGAATCATTGGTTTGGACCCGCCGGTGATCCTAGAGGTGCAGGAATTGGTACTCCAGAGGCCATAAAACTTAATATCCTTCGAATTGCGCCTGTGCCTGTATCAGAGAAACAGCTTCTTTGTATATGCAAGGGTAACACAGTGTACAATGACCCTTTCCCGTATCTTGCGCGGAGCCTTTGGCGCTGGAATTTTGGTTACCGTCACATGACACTGCAGTTGCTAATCACAATTTCTGATCCATGTGTAGCTTTGACATCAACAGTTGCTTCAGTAGCCAATATGCTGAATCTTGCAATTTCAACCATGACTTTGTTAGAGGTAATCAAGGATGCTTCAATCAATTCAAAACCGCTTGATTTACCTTTGGATTACCCAATTGTTCTGAACCCAGATAGTATCTTACCCAATTTAAAGCCAAAAGATATAGATGAATCTTCTTCATCACTCATAAAGCCCCTTATCGGATGGAATGTTCCGCCAACTGATGCTGAGATCACTGACATTAACAAAAAGTTCTTTACACAGCTGAATGCTAAGTTCATGAACACTAATAATTTGGATAAGGGTGAGTTTATTAGTAGTTTGAAGTCTTATCTAGAAAACATCAGGGACAAAGTAGGGGTTGTGATTGAGGTCGATACGTCCAGTAGTGATTATAACAGGATTTTGATTGATAAGCTTGGAACATTCGTGGGTAAAGATGTTGCTGGCCTGGTATTGAATGGGTGTGTATCTTTGGAGATTTGGGACGTGATTGAGGCTTTGATTGTTAATGTTACTATTGAGCATTCTTGCTATTCAAACCTGATTACCAAATTAGTGGAAAAAAGAGGTCTTATTTGCTCTGTTTGTGCATAA 2043 0.4028 MGPRYLMYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPEIILDNKVMVFVGPMVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLLEANPRMTLFTGSSRVAEKLALDLKGRVKLEDAGFDWKILGPDVHQEDYTAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLTDLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDNNFELVTKEIFGPFQIITDYKNSQLSVVLDALERMHNHLTAAVVSNDPLFVQEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLNILRIAPVPVSEKQLLCICKGNTVYNDPFPYLARSLWRWNFGYRHMTLQLLITISDPCVALTSTVASVANMLNLAISTMTLLEVIKDASINSKPLDLPLDYPIVLNPDSILPNLKPKDIDESSSSLIKPLIGWNVPPTDAEITDINKKFFTQLNAKFMNTNNLDKGEFISSLKSYLENIRDKVGVVIEVDTSSSDYNRILIDKLGTFVGKDVAGLVLNGCVSLEIWDVIEALIVNVTIEHSCYSNLITKLVEKRGLICSVCA 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03307 680 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 9 420 IPR044638 GO:0004029
Spst3g03307 680 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 217 228 IPR016160 GO:0016491
Spst3g03307 680 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 194 IPR016162 GO:0016491
Spst3g03307 680 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 195 384 IPR016163 GO:0016620
Spst3g03307 680 FunFam Aldehyde dehydrogenase 12 200 388 - -
Spst3g03307 680 Pfam Aldehyde dehydrogenase family 25 385 IPR015590 GO:0016491
Spst3g03307 680 SUPERFAMILY ALDH-like 23 410 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03307 Spst-Chr3 82912126 82920009 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03307 4 418 Aldehyde Dehydrogenase Gene Family AT5G62530 81.579 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03307 K00294 - gmx:100806579 751.895