Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03298 ATGGAACCGGGAGAAGACTGGAAGATAGAATATAGAGACATCAGCTTCAAACTCAAGTCTTTCATTCATGCCATGGATTTCCAACCTTCCTTCCTGGTAATTATCTCATTCCTCTTGTTGCTGCTTTGCTTTGTAAGGATTTGCAAGAACAAAATCAGAGGGAGAAGTGTGGTTCATAAGCTTCCCCCAGGCCCACGGAAGTTTCCTCTAATAGGAAACCTTCACGAACTGGCAAGGGCAGACACGCTTCCACACCATACCCTTCGAAATCTCTCACATGAATATGGACCTCTGATGCACCTTCAACTGGGTGAAATTTCTGCTGTGATTGTGTCATCCCCTGACATGGCAAAGGAGATAATGAAGACACACGATCTTAATTTTGTGCAGAGGCCAGAACTCCTTTGTCCTAAAATCCTGGCCTATGAATCAACCGATATTGCCTTTGCTCCGTACGGTGATTACTGGAGACAGATGAGGAAAATATGTTCACTAGAGCTTCTTAGTGCCAAAAGGGTTCAGTCTTTCTCCTTCATTCGTGAAGATGAGGTGGCTAAGCTCATTCAATCCATTCAATTGTGTGCATGTGCAGGTTCACAAGTCAATGTTTCTAAATGTGTTTTTTCGTTTGTAAGCACCCTTGTTTCAAGGACAGCCTTTGGTAAAAAATCTGAGAACGAGGATGAGCTTTTGTGTTTGCTGAAGAAAGGAGCGGAACTCACGGGAGGGTTTGATCTTGCTGATTTGTTCCCCTCATTGAAAGCTCTTCATTTCATAACTGGGATGAAAGCTAAGCTGGAGGACATGCATAAAGAGCTGGACAAGATTTTAGAAAACATTATCAAAGAGCATCAAGCAAAGCGTGGCAAGGGAGAAGCAGGAGAAAATTTGGTTGATGTTCTTTTGCGCGTGCAACAAAGTGCCACCCTCGAGGCTCCAGTAACCGTCAACAACATCAAAGCCGTGATATGGGACATATTCGGGGCTGGGACAGATACTTCAGCGACAGTACTAGAGTGGGCTATGTCAGAGCTGTTGAAAAACCCAAGAGTGATGAAAAAGGCACAGATTGAAATAAGAGAAGCTTTTAGGGGAAAGAAAATTATTCGTGAGAGTGATATATATGAACTAAGCTACTTGAAGTCGGTGATCAAAGAAACCTTAAGGTTACATCCACCTGCTCCTTTGTTGCTCCCAAGAGAATGCAGGGATTCATGCAAGATAGGTGGATATGAAATACCTGTGAAGACTAAAGTGATAATAAATGCATGGGCGCTTGGAAGAGATCCCAAGCATTGGTACGATGCAGAGAAGTTTTTACCTGAAAGATTTGATGAGACAAGTTTAGATTTTAAAGGGAATAATTTTGAGTACATTCCTTTTGGGGCAGGGAGGAGAATATGTCCTGGCATTTTACTTGGCTTAGCTAATGTTGAGCTTCCTCTGGCTGCATTGCTCTATCACTTTGATTGGAAACTACCCAGTGGAATGAAACCACAAGAATTTGATATGACAGAAGCCTTTGGAGCTACAGTGGGAAGAAAAAACAACCTATATCTAATACCAACTATGTATGACTATTCCCTTAGTCAGGTCATTGCCACATGA 1608 0.4248 MEPGEDWKIEYRDISFKLKSFIHAMDFQPSFLVIISFLLLLLCFVRICKNKIRGRSVVHKLPPGPRKFPLIGNLHELARADTLPHHTLRNLSHEYGPLMHLQLGEISAVIVSSPDMAKEIMKTHDLNFVQRPELLCPKILAYESTDIAFAPYGDYWRQMRKICSLELLSAKRVQSFSFIREDEVAKLIQSIQLCACAGSQVNVSKCVFSFVSTLVSRTAFGKKSENEDELLCLLKKGAELTGGFDLADLFPSLKALHFITGMKAKLEDMHKELDKILENIIKEHQAKRGKGEAGENLVDVLLRVQQSATLEAPVTVNNIKAVIWDIFGAGTDTSATVLEWAMSELLKNPRVMKKAQIEIREAFRGKKIIRESDIYELSYLKSVIKETLRLHPPAPLLLPRECRDSCKIGGYEIPVKTKVIINAWALGRDPKHWYDAEKFLPERFDETSLDFKGNNFEYIPFGAGRRICPGILLGLANVELPLAALLYHFDWKLPSGMKPQEFDMTEAFGATVGRKNNLYLIPTMYDYSLSQVIAT 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03298 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Spst3g03298 535 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS E-class P450 group I signature 116 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 Pfam Cytochrome P450 62 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PANTHER OS08G0105600 PROTEIN 86 525 - -
Spst3g03298 535 Gene3D Cytochrome P450 48 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 FunFam Cytochrome P450 71D8 55 522 - -
Spst3g03298 535 CDD CYP71-like 94 518 - -
Spst3g03298 535 SUPERFAMILY Cytochrome P450 62 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 Coils Coil 259 283 - -
Spst3g03298 535 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03298 535 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03298 Spst-Chr3 82818074 82822037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03298 63 524 Cytochrome P450 AT3G26310 45.842 1.79e-145 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03298 - - gmx:100794503 858.211