Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03297 ATGGAATTCCAACCTCCTTTCATGGTGATTGCCTTGTTCCTCTTGTTACTGTTTTGGCTAGCAAGAATTTACAAGCAGAAAATCGAAGTGAGGAGTGTGGTTCAAAAGCTTCCCCCAGGTCCATGGAAGCTTCCTCTAATAGGGAACCTTCATCAACTAGCAGGAGCAGGCACACTTCCACACCATACCCTTAAAAATCTATCACACAAATATGGACCTCTGATGCACCTTCAACTGGGTGAAATTTCTGCTGTGGTTGTGTCATCCCCTGACATGGCCAAGGAGATAATGAAGACACACGATCTTAATTTTGTGCAGCAGCCAGAACTCATTTGTCCTAAAATCCTGGCCTATGGATCAACCGATATTGCCTTTGCTCCATATGGTGATTACTGGAGACATATGAGGAAAATATGTACGATAGAGCTTCTTAGCGCCAGAAGGGTTCAATCTTTCTCCTCCATTCGGGAAGATGAGGTGGCTAAGCTCATAGGATCCATTCAAGCGTGTGCATGCGCAGGTTCACAAGTCAATGTTTCTAAAAGCTTTTCATCTTTGGTAAGCACCATTGTGTCAAGAGCAGCCTTTGGTAAAAAATCTGAGCATGAAGACCAACTTTTGTTTTTGCTAAAGCAAGGAGTGGAACTGGCGGGAGGGTTTGATCTTGTTGATTTGTTCCCTTCAATGAAACCTATTCATCTCATAACTGGGATGAAAGCTAAGTTGGAGAAGATGCATGAAGAGCTGGACAAGATTGTAGACAACATTATCATAAAGCATGCATCAAAGCATGGAAAGGGAGAAGCAGATGAGAATCTGGTTGATGTTCTTTTGCGCGTGCAACAAACTGCTACCATCGACACCCCATTAACAATCAACAACATCCAAGCCATCATATATGGGCGGGAGTAA 912 0.4331 MEFQPPFMVIALFLLLLFWLARIYKQKIEVRSVVQKLPPGPWKLPLIGNLHQLAGAGTLPHHTLKNLSHKYGPLMHLQLGEISAVVVSSPDMAKEIMKTHDLNFVQQPELICPKILAYGSTDIAFAPYGDYWRHMRKICTIELLSARRVQSFSSIREDEVAKLIGSIQACACAGSQVNVSKSFSSLVSTIVSRAAFGKKSEHEDQLLFLLKQGVELAGGFDLVDLFPSMKPIHLITGMKAKLEKMHEELDKIVDNIIIKHASKHGKGEADENLVDVLLRVQQTATIDTPLTINNIQAIIYGRE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03297 303 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03297 303 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03297 303 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03297 303 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 300 - -
Spst3g03297 303 SUPERFAMILY Cytochrome P450 38 299 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03297 303 Gene3D Cytochrome P450 31 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03297 303 Pfam Cytochrome P450 38 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03297 303 Coils Coil 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03297 Spst-Chr3 82814710 82815621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03297 35 299 Cytochrome P450 AT3G26320 40.809 3.88e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03297 - - gmx:100794503 477.248