Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03296 ATGACATGTGTGCAGGACATATTCGGGGCTAAGGCTGGGACTGATACCTCAGCAACAGTACTAGAGTGGGGTATGTCAGAGTTGTTGAAAAACCCAAGAGTGATGAAAAAGCTACTTGAAGTTAGTGATCAAAAAGACATTGAGGTTACATCCACCTGCTCATTGTTGATGCCAAGAGAATGCAGGGAAGCATGCATGATAGGTGGACATGAAATACCTTTGAAGACTAAAGTGATAACATATGCATGGGCCCTTGGAAGAGATCCAAAGCATTGGTATGATGCAGAGAAGTTTATACTTGAGAGGTTTGATGGCACATATTTTGATTTTAAAGGGAATAATTTTGAGTATATTCCTTTTGGGGAAGGGAGGAGAATGTGCCCAGGCCTTTTACTTGGCTTGGCTAATGTTGAACTTCCCCTGGTTGTCTTCCTCTTTCACATTGACGAGGAACTCCCCAATGGAATGAAACCGGAGAACTTCGATATGACTAAAATCTTTGGAGCTACAGTGGCATGGAAAAACTATTGTAAAACTTAA 540 0.4148 MTCVQDIFGAKAGTDTSATVLEWGMSELLKNPRVMKKLLEVSDQKDIEVTSTCSLLMPRECREACMIGGHEIPLKTKVITYAWALGRDPKHWYDAEKFILERFDGTYFDFKGNNFEYIPFGEGRRMCPGLLLGLANVELPLVVFLFHIDEELPNGMKPENFDMTKIFGATVAWKNYCKT 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03296 179 Pfam Cytochrome P450 54 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 Pfam Cytochrome P450 5 40 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 Gene3D Cytochrome P450 1 47 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 PRINTS P450 superfamily signature 12 29 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 PRINTS E-class P450 group I signature 21 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 PANTHER OS08G0105600 PROTEIN 5 39 - -
Spst3g03296 179 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Spst3g03296 179 SUPERFAMILY Cytochrome P450 12 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03296 179 Gene3D Cytochrome P450 50 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03296 Spst-Chr3 82804865 82805475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03296 12 175 Cytochrome P450 AT3G26300 43.085 3.42e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03296 - - gmx:100794503 243.047