Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03295 ATGGAAGTCCAATCGTCCTTGGCAGTGCTCACCCTCTTGCTCTCATTATTAGTGCTTTTGCTTGCAAAGAACTTCAAGCAAAAGGGTCACCATAAACTGCCACCAGGGCCATGGAAGCTACCTATCATAGGGAACCTGCATCAACTGGCAGTAGCAAGTTCACTTCCTCATCATGCTCTCAGAGACATAGCCCAAAAATATGGACCCTTGATGCACCTACAACTAGGTGAGATTTCTGCGGTGATTGTATCAAGCCCCAAGATGGCCACGGAAATAATGAAAACACATGATCTTGCTTTTGCACAGAGGCCTAAATTTCTTGTTTCTGATATTATGGCCTACGGATCAGTAGACATTGCTTTTGCTCCATATGGTGATTACTGGAGGCAAATGAAGAAAATATGTATGTTGGAGCTTCTAAGTGCAAAGAAGGTTCAGTCTTTCTCCCACAATAGACAGGAAGAGGTAGCTAAACTCATAGGAAAAATCCAGTCATCAGCAGGTGCACCAGTCGATCTCACAACCATGATTAACACTTACGTAAGTACTTTTGTGTCCATAACAGTATTTGGTAACATAACTGAAGATCGTGAAGAGTTTTTGTCGATTGTAAAGGAAGCAATAGAAGTGGCAGATGGCTTTGATCTTGCGGATATGTTTCCCTATTTCAAACCTATACATCTCATAACCAGATTGAAAGCCAAATTAGTTAGGATGCATAAGAAGGTTGACAAGATCTTCGGGAAGATCATAAAGGATAATCAAGTAAAGCTTACTAGAGCAAAGGAAGGCAAGGAAGAAGAACAGAACGAAAATCTTGTTGAAGTTCTTTTAAGAGTCCAACACAGTGGCATCACTGAGACCCCTCTTACAACCGACAATATCAAAGCTGTTATTTGGGACATGTTTGCTGCTGGAACGGATACTTCGGCAAAAGTAATAGAGTGGGCAATGTCAGAAATGATGAAAAACCCGAGAGTTAGGAAGAAGGCACAAGCTGAGATTAGAGAAACGTTGAGAGGAAAGGAAACAACACATGAGAACAACCTAGGCCAACTTACCTACTTAAAGGCAGTAATAAGAGAAACCTTGAGGTTACACCCACCTCTTCCTTTGTTACTTCCCAGAGAAAGCAGAGAATCGTGCAGGATCGATGGATACGATATACCCATCAAGACTAAAGTCATAGTGAACGCATGGGCAGTTGGAAGAGATCCTGAGTACTGGCATGATGCTGAGAGCTTCATACCAGAAAGGTTCCATGCTACATCTATCGATTTCAAAGGAACAGACTTTGAGTACATCCCTTTTGGGGCAGGAAGGAGAATGTGTCCGGGTATGTCATTCGGTATAGCCAGCGTCGAGTTTGCTCTTGCCAAATTACTCTATCACTTTAACTGGGAACTCCCAGAAGGAATGAAACCAGAGGAATTTGACATGGATGAAGCATTTGGAGCAGGGGTTGGAAGGAAAAACAACCTTCACTTGATTCCCGTTCCTTATGATCATCCTTCAATCCATGATAATGGCAAATGA 1536 0.4238 MEVQSSLAVLTLLLSLLVLLLAKNFKQKGHHKLPPGPWKLPIIGNLHQLAVASSLPHHALRDIAQKYGPLMHLQLGEISAVIVSSPKMATEIMKTHDLAFAQRPKFLVSDIMAYGSVDIAFAPYGDYWRQMKKICMLELLSAKKVQSFSHNRQEEVAKLIGKIQSSAGAPVDLTTMINTYVSTFVSITVFGNITEDREEFLSIVKEAIEVADGFDLADMFPYFKPIHLITRLKAKLVRMHKKVDKIFGKIIKDNQVKLTRAKEGKEEEQNENLVEVLLRVQHSGITETPLTTDNIKAVIWDMFAAGTDTSAKVIEWAMSEMMKNPRVRKKAQAEIRETLRGKETTHENNLGQLTYLKAVIRETLRLHPPLPLLLPRESRESCRIDGYDIPIKTKVIVNAWAVGRDPEYWHDAESFIPERFHATSIDFKGTDFEYIPFGAGRRMCPGMSFGIASVEFALAKLLYHFNWELPEGMKPEEFDMDEAFGAGVGRKNNLHLIPVPYDHPSIHDNGK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03295 511 Gene3D Cytochrome P450 26 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PANTHER OS08G0105600 PROTEIN 58 502 - -
Spst3g03295 511 Coils Coil 251 271 - -
Spst3g03295 511 CDD CYP71-like 66 494 - -
Spst3g03295 511 Pfam Cytochrome P450 34 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Spst3g03295 511 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03295 511 FunFam Cytochrome P450 71D8 26 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03295 Spst-Chr3 82793963 82795763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03295 5 504 Cytochrome P450 AT3G26300 41.961 3.19e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03295 - - gmx:100800554 789.645