Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03289 ATGCAAACGTCTCAGAAACACCCAAGTTCGGCTGGTGTACACTTCTATCACCACCAGCCGGTGCAAGGCATTTACCAAGTGTTGCAAAACAATCTATGCCATGACACTCATGATAGCAGCAGCCAGGGAACTAGCGTTTCTTTTGAAACCTGCAAGGAGCAATACTTTACTCTTGAATCATGCCCGGCACCCACTACTGGTTTCATGGATTGTGATGATTCTCCTTCCTATGCTAGTGTGTCATCTAAAAGGACTCCATTTTCTCCACAAGGGTCTCAGTCATGCTATTCAGATCACCGCCAGTCATCTGACAACACCTATGGATCGCCAATAAGCGGTTTGTCTAGCGTTGATGATGGGCATGAACTGAAGCACAAACTTAGAGAACTGGAGATTTCATTGTTGGGGCCTGACGAATCTGACATTGTCGACAGTTATGGTTGCCTCGTCAAGGGTAGAAGCCTCTACGGAGCATCTCAGTTGGCTAAACATAACTGGGATCAGATTGCTGAAAATATTTCACAATTTGACCTGAAAGGAGTCCTTGAGGTATGTGCACAGGCCGTGTCTGATGATGACATTCCAACAGCAAGAGGGTGGATGGATAATGTATTGGGGAAAATGGTATCAGTCTCTGGAGATCCAATTCAGAGGCTGGGTGCTTACATGTTGGAGGGGCTTAGAGCAAGGTTCGAATCATCAGGGAATCTCATCTACAAATCCTTGAAGTGTGAACAACCAACAAGCAAAGAACTAATGAGTTACATGCACATCCTTTACCAGATTTGCCCATACTGGAAGTTTGCATACACATCTGCAAATGCTGTCATTATAGAAGCTATGGCTAATGAGTCCAGGATTCACATAATGGATTTCCAAATAGCGCAGGGCACACAGTGGTATTTACTTATCCAGGCCCTTGCACATAGGCCAGGGGGACCCCCTTCCCTTCGTGTAACCGGTGTTGATGATTCGCAGTCGTTTCATGCTCGAGGTGGAGGACTTGATATTGTAGGAGAAAGATTGTCAGATTTTGCCAGGTCTTGTGGAGTTCCATTTGAATTCCACAGTGCCGCAATGTCTGGCTGTGAGGTTGTGCGAGGAAATGTTGAAATTCGACCGGGGGAAGCTCTGGCTGTAAATTTTCCTTTTGTTTTGCACCACATGGCAGATGAGAGTGTGAGCACTGAGAATCACAGAGATAGATTGTTGAGGTTGGTCAAGAGCTTGTCTCCCAAGGTTGTTACCCTTGTCGAGCAAGAATCCAACACCAACACATCTCCTTTCTTTTACAGGTTTCTTGAGACTCTGGACTACTATACTGCCATGTTTGAATCCATAGATGTGGCTTGCCCCAGAGATGATAAGAAGCGGATTAGCGCAGAGCAGCACTGTGTGGCACGAGACATTGTCAACATGATAGCTTGTGAGGGGGTTGAGAGGGTGGAAAGGCATGAACTTTTGGGAAAGTGGAGGTCAAGACTTTCCATGGCTGGATTTAAACAGTGCCAATTGAGTTCTTCCGTGATGGTTGCTACCCAAAATCTCCTAAAGGACTTCAGTCAAAATTATAGACTTGAACATAGAGATGGTGCCCTTTATCTTGGTTGGATGAACAGACATATGGCCACTTCTTCTGCTTGGAGTTGA 1650 0.4564 MQTSQKHPSSAGVHFYHHQPVQGIYQVLQNNLCHDTHDSSSQGTSVSFETCKEQYFTLESCPAPTTGFMDCDDSPSYASVSSKRTPFSPQGSQSCYSDHRQSSDNTYGSPISGLSSVDDGHELKHKLRELEISLLGPDESDIVDSYGCLVKGRSLYGASQLAKHNWDQIAENISQFDLKGVLEVCAQAVSDDDIPTARGWMDNVLGKMVSVSGDPIQRLGAYMLEGLRARFESSGNLIYKSLKCEQPTSKELMSYMHILYQICPYWKFAYTSANAVIIEAMANESRIHIMDFQIAQGTQWYLLIQALAHRPGGPPSLRVTGVDDSQSFHARGGGLDIVGERLSDFARSCGVPFEFHSAAMSGCEVVRGNVEIRPGEALAVNFPFVLHHMADESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFYRFLETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFKQCQLSSSVMVATQNLLKDFSQNYRLEHRDGALYLGWMNRHMATSSAWS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03289 549 Pfam GRAS domain family 181 548 IPR005202 -
Spst3g03289 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 128 539 IPR005202 -
Spst3g03289 549 MobiDBLite consensus disorder prediction 79 113 - -
Spst3g03289 549 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Spst3g03289 549 MobiDBLite consensus disorder prediction 79 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03289 Spst-Chr3 82756808 82758457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03289 1 548 GRAS Transcription Factor Family AT4G17230 60.000 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst3g03289 GRAS 1.7e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03289 - - gmx:100792931 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03289 3 82756808 82758457 Spst6g01273 6 11730757 11732418 PCT