Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03258 ATGAAGCTCGACAACTCCAACGGCCAGACGCCCCTCACCGCTGACGTTTCGATGCTGCAGGAAGCCGATGCCGACGCCGAAGAGATATTCGTGCCGCCGCTCAACTTCGCCATGGTCGACAACGGCATTTTCCGGTCTGGCTTTCCCGATTCTGCTAACTTCGGATTCCTGAAATCGCTCCGTCTCCGTTCCGTAATGTGTTTGTGTCCCGAACCGTATCCAGAAACGACGTTGGAATTTTTGAAGGACAACGGAATAAGGCTTTATCAGTTCGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAAATGATACAATTCGCGAAGCTTTGAAAGTAGCCCTCGATGTTAGGAACCACCCCCTTCTGATTCATTGTAAACGAGGAAAGCACCGCACTGGTTGTCTTGTCGGATGCATAAGAAGATTGCAGAGGTGGTGTCTATCATCTGTTTTTGATGAGTACCAAAGGTTTGCAGGTGCCAAAGCCAGGGTGTCAGACCAGAGGTTCATCGAATTATTTGATATATCCTGTTTGAAGCACTACCCACTGCCATTTTCATGCTCAAGGAAATAG 579 0.4888 MKLDNSNGQTPLTADVSMLQEADADAEEIFVPPLNFAMVDNGIFRSGFPDSANFGFLKSLRLRSVMCLCPEPYPETTLEFLKDNGIRLYQFGIDGCKEPFVNIPNDTIREALKVALDVRNHPLLIHCKRGKHRTGCLVGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKHYPLPFSCSRK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03258 192 ProSitePatterns Tyrosine specific protein phosphatases active site. 125 135 IPR016130 GO:0016311|GO:0016791
Spst3g03258 192 FunFam probable tyrosine-protein phosphatase At1g05000 29 179 - -
Spst3g03258 192 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 30 177 IPR029021 -
Spst3g03258 192 Pfam Tyrosine phosphatase family 31 182 IPR004861 -
Spst3g03258 192 ProSiteProfiles Dual specificity protein phosphatase domain profile. 35 189 IPR020422 GO:0006470|GO:0008138
Spst3g03258 192 PANTHER TYROSINE-PROTEIN PHOSPHATASE 27 181 - -
Spst3g03258 192 Gene3D Protein tyrosine phosphatase superfamily 29 179 IPR029021 -
Spst3g03258 192 PRINTS Plant and fungal dual specificity phosphatase signature 103 117 IPR020428 GO:0016791
Spst3g03258 192 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Spst3g03258 192 PRINTS Plant and fungal dual specificity phosphatase signature 67 80 IPR020428 GO:0016791
Spst3g03258 192 PRINTS Plant and fungal dual specificity phosphatase signature 30 47 IPR020428 GO:0016791
Spst3g03258 192 CDD PFA-DSP_Siw14 30 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03258 Spst-Chr3 82548640 82551349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03258 13 192 Protein tyrosine phosphatase (PTP) family AT4G03960 67.568 1.50e-95 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03258 K18045 - gmx:100785520 363.614