Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03236 ATGACTCAGATACATCATATGATCCAAAACCACTCATACAGCTATATGATGGATGGCACTGAGATCAAGTCATCAGTTGATGTAATCGCATGTGGTTCCTTGAACAATACAAACAACCCCGCCACCACAACCATCACCAACCCACCACATTCACGATTACCATTGTTGACCAAGATCCATGCTGGTTACTTTTTCGTATGCCTTTCCTTTGGTGCACAAGCTTTGCTGTGGAAGAGTTTGAGTAAACACAACAAGGACTCAAACACCCTCTGGCACGGATTCAATCTGATGCCTTCCGTTGCATTTCTACTACTTTGGTGCGTGGCACTGCTCACTGCCACTACTTTATCTTTACTTTTCCTGCTCAAGTGCATCTTGCACTTTGATACGGTGAAGGAGGAGTTCTCACACCATACTGGAATGAACTGCATGTATGCTCCTTGGATTTCTTGGCTTCTCATGCTTCAATCAGCACCCATGATCGTTCACACAACTTGCTATTACAAAGTTCTTTGTTTGGCTTTTTCCTTTGTAATATTTCTGATTGATCTTAAACTTTATGGACAATGGTTCACTACCAAAAAGCAGTTTCTGTCTACTGTGGCAAACCCTACTAGCCAGGTTTCGGTTATAGGGAACTTGGTATCAGCTCAAGTTATTGCAGAAATTGGTTGGAAAGAGAGTGCAGTTTTAATGTTCTCACTCGGATTGGTATTCTATTTAGTTATATTTATAACGCTATATCAGCGTCTGACAGTACTAAGACCAGGTTACTTCTTGTTTATTGCTGCACCAAGCGTAGCAAGTTTAGCCTGGAAATCCATCTCAGGTGCTTTTGTCACCCCATCAAAGATGCTCCTCTTTCTGTCTTTGTTCCTTTTTATGTCTCAGGTAACGTTCTTTTCTGATTTCAATATTCTAGAGCTTTAA 930 0.4118 MTQIHHMIQNHSYSYMMDGTEIKSSVDVIACGSLNNTNNPATTTITNPPHSRLPLLTKIHAGYFFVCLSFGAQALLWKSLSKHNKDSNTLWHGFNLMPSVAFLLLWCVALLTATTLSLLFLLKCILHFDTVKEEFSHHTGMNCMYAPWISWLLMLQSAPMIVHTTCYYKVLCLAFSFVIFLIDLKLYGQWFTTKKQFLSTVANPTSQVSVIGNLVSAQVIAEIGWKESAVLMFSLGLVFYLVIFITLYQRLTVLRPGYFLFIAAPSVASLAWKSISGAFVTPSKMLLFLSLFLFMSQVTFFSDFNILEL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03236 309 Gene3D - 54 308 IPR038665 -
Spst3g03236 309 PANTHER S-TYPE ANION CHANNEL SLAH3 42 299 IPR030183 GO:0006873|GO:0008308|GO:0016020
Spst3g03236 309 Pfam Voltage-dependent anion channel 59 301 IPR004695 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03236 Spst-Chr3 82359403 82360332 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03236 K26672 - gmx:100779095 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03236 3 82359403 82360332 Spst3g03236 3 82359403 82360332 ECH
Spst6g01205 6 11042786 11046969 Spst3g03236 3 82359403 82360332 ECH
Spst5g00723 5 6264390 6265568 Spst3g03236 3 82359403 82360332 ECH
Spst11g01119 11 35522432 35523529 Spst3g03236 3 82359403 82360332 ECH