Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03223 ATGGCCAATATGTCTGTACCTCCGCCTCTCCCTATTTCTATATATCCACCTGCTTCACCTGTTGTAATCACAGACACGGACCCAGGACATTCTTCAGGAATGTATTTGCAGACACTGAATATGGCTGACTTGTCGGAATGGCCAAAGAAAGATAACCGTCGCATGCTTCATGTTGTCTACCGTGTTGGTGACCTTGATCGCACCATCAAGTTTTATACAGAATGCTTTGGAATGAAGCTTTTGAGGCATAGAGATATCCCGGAAGAGAAATATGCTAATGCTTTTCTTGGATTTGGCCCTGAAGAAACCCATTTTGTTGTTGAATTAACATATAATTATGGGGTGACCTCGTATGACATAGGGGATGGCTTTGGACATTTTGCAATTGCAACTCAGGATATTTACAAATTGGTTGAGCACATCCGGGGAAAGGGAGGAAACATCACTAGGGAGCCTGGACCAGTTCAGGGTGGCACTACTGTTATCGCCCTTGTGAAGGATCCCGATGGTTACACTTTTGGACTTATCCAAAGACCTACAGTCCATGACCCATTTTGTCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCAATTAAATTTTATGAAAAGGCTTTGGGCATGAAGGTGGTGAGGACGGTTGATAAGCCCGAGTCTAAGTACACTATAGCTATGCTTGGGTATGGAGAGGAGCATGAGACAACTGTGTTGGAATTGTCGTATAACTATGGTGTCACTGAATACTCTAAGGGAAATGCCTATGCACAGATTGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTAGTAAGCCAAGTTATAAAAGAAGTTGGAGGAAAGATTATTCGGCAACCAGGACCAATTCCTGGCCTTAATACAAAAACCACTTCATTTTTAGATCCAGATGGATGGAAAACTGTCTTGGTTGACAATGTTGATTTCTTGGAGGAACTGAAGTGA 963 0.4268 MANMSVPPPLPISIYPPASPVVITDTDPGHSSGMYLQTLNMADLSEWPKKDNRRMLHVVYRVGDLDRTIKFYTECFGMKLLRHRDIPEEKYANAFLGFGPEETHFVVELTYNYGVTSYDIGDGFGHFAIATQDIYKLVEHIRGKGGNITREPGPVQGGTTVIALVKDPDGYTFGLIQRPTVHDPFCQVMLRVGDLERSIKFYEKALGMKVVRTVDKPESKYTIAMLGYGEEHETTVLELSYNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVSQVIKEVGGKIIRQPGPIPGLNTKTTSFLDPDGWKTVLVDNVDFLEELK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03223 320 CDD GlxI_Ni 55 176 - -
Spst3g03223 320 Gene3D - 33 178 IPR029068 -
Spst3g03223 320 ProSitePatterns Glyoxalase I signature 1. 187 208 IPR018146 GO:0004462|GO:0046872
Spst3g03223 320 Gene3D - 181 320 IPR029068 -
Spst3g03223 320 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 184 312 IPR037523 -
Spst3g03223 320 FunFam Lactoylglutathione lyase 180 320 - -
Spst3g03223 320 ProSitePatterns Glyoxalase I signature 1. 57 78 IPR018146 GO:0004462|GO:0046872
Spst3g03223 320 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 185 312 IPR029068 -
Spst3g03223 320 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 55 173 IPR004360 -
Spst3g03223 320 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 187 306 IPR004360 -
Spst3g03223 320 PANTHER LACTOYLGLUTATHIONE LYASE 38 319 - -
Spst3g03223 320 NCBIfam lactoylglutathione lyase 54 178 IPR004361 GO:0004462|GO:0046872
Spst3g03223 320 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 54 178 IPR037523 -
Spst3g03223 320 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 53 184 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03223 Spst-Chr3 82252098 82255421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03223 187 311 Calmodulin-binding Proteins AT1G08110 27.815 2.74e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03223 K01759 - gmx:100793089 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03223 3 82252098 82255421 Spst3g03223 3 82252098 82255421 ECH
Spst6g01188 6 10919312 10928328 Spst3g03223 3 82252098 82255421 ECH
Spst3g03223 3 82252098 82255421 Spst6g01188 6 10919312 10928328 PCT