Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03200 ATGGATTGCGACGAGCCTCCATCTCCCTATCCCCATTCTTCCTCTCTTCTCAAGGACATCTCCAACTTCACCACTCCCAGACGTCCCCCATTCTCTCTCACTACCGCCCGATCTCCCACCACTCAATTCTTCACTGCCTCCAAACACTCCTCCACCTTCAACCGCCGACCCAAAAAATCATCCACCGCAGCCACCTCCAAAAAACTCAAGGCCTTCCAATCGGAGCTGTCCCAGTCCTCCCGTAAGGCCCAAATCCAGAAGGAGCGCTCCCTCAGATCCCTCGCCAAGTCTCTCTCCGTCTGGCTCAACTTTCTCCTCCAAAACCCTGATTCCTGTGGCTGCCACTTCTCCACTGCGGATGCTTCCGTTCCCGCTACCAACGGCAAGCGAGATGGTACCCCTGGAATCTCCGTCGTTGGCGTTGATTCCACCTGGCGCACTCCCAAGCGCCAGAGGAAGACTTGGTCAGCTAAGGAAAATGCTGCCACGGGGGTTGAGGTTCCTGATTCTTCGTTTTCGCACCTCAGTGATTCTCTCAAGGATATTTGCAGTTTCGATGATTTGAAGCAGCGAATGAGAGTGTATTTCAGCCTCACAGCTTGTAAAGAGATCTTCCTACAAATGAACCGTGTAGCCAAGACAATTGACGAAGGAAGACTGATTATGAAGGCGCATTGCCCTATAGTAACTGATGTTGGGTTGAAGGATAAGGCCATGAGAATTCTCATGTGCTATAATTCAATTTGGTTACGAATTGGAATAATGGTAGTCGACAAACTATTTTTTTCGCATGAAGGTTTAGCTAAAGCCCATGCTTATAACAAAATGGTTGAAGGCGTGTATAGGTCAGGTTACTATGAGAATTTGGGGAATGTGATATTGAAAAGAATTTTGTTGCTTGTGCTTATTCTGGATAAAGCTAAATGCCAGAGTTACCTCCCACTGGAATATGGTATTGATGGATTGGATGGGGGATCTCCTTTGTTATTCAAACCAGAATCCTGGATTAAATCAAGCAGTCAGCTGATTCATGGTTACAAATTATCTCATCAGCAGGAACCTCTTGTTGAGTATGATTTCAGGATCAGAGATTTATTTGTAGATCTTCAAGATGGATTAAAATTGTGTAGAGCGATTCAGCTCTTGCAGCATAATTCTTCGATCCTCATGAAAATTGTAGTTCCCTCTGATACTCCTAAGAAAAAATTATCAAACTGTGGTCTTGCTCTGCAATATATTAGACAAGCTGGTGGGTCACTACTTGATGAAGATGGCATCACGATTGTGGCAGATGATATTGCTAATGGAGACAAAGAACTTACACTTTCCTTGCTCTGGAATATGTTTGTTCATTTGCAGGTGCTACCTCTTTTGGTTGATCAAACAAGTTTAGTTGGGGAAATTTCTAAAATTCGAGGAGGCATGGGTCTCGTAAACAATGCAAATTCTACCTCTATGGAGTTGCTTTTGAATTGGATCCAGGCAGTTTGTGACAACTATGATTGTTTGATTGACAATTTCCATTCCCTTGTTGATGGCAAAGCTATCTGGTGCTTACTTGATTATTACTTCCAGAAAGAACTTCATAATTCCTGTTCATTGAAGGAAGTTAGTATGAAAAGTGGCAAGGCATCAATTATGTCTGTTGATGAATATTCAGATGCACTATATAATTTTATATTATCCCAGAAGTTGACTACATTACTGGGGAACTTCCCAGAGGTACTTCATATTAGTGAGCTACTTCAATATAATGGTGCTTGCAGCGATCGAAGTGTGGTGATTTTGTTGGTTTTCCTGGCAAGCCAATTATTTGTCAAGAAAAACTTGGATCACTTAAATTTCCGTAAACTCTTGTGTCATGACTGCCAAAGTCCGAACCATAGACATTTGAGGATGCTACGGTGCCTTTCGAATTCTGACTCAATACAAAAGCATCATGCTTCCGATGTGCATGGCAATGAAGATGCCGCGAGAAAATTCAAGGCCATCCAAGCTTGGTGGCAAGATATGGCTGAAAGAAATGGTCTCAACAAACCAGCTGTCTCTAATTTGCAGGGATCCAGGACCACTGAATGCAACATCAACAATAAAAGAGAAAATGCTGCAAGAACAATACAACTGCATTTCAGAGGATTGGTTGTCCGGTGGAAGTTTCTGAAGATGGTAAATGCCGTTACCCTTTTGCAAACTGTTTTCAGAGCTTGGCTAAAAGTGAGGCAAGAGTCAGTCTGTGTGATATTATCCACTGTTCAAGTCTGTGACTCTTCATATGAAATATTGAAGCAATCACAAACATATCCAGAAATATTGAAGCAATCACAAACATATAAGAGATATGCCATGCTTTTCATTCATAGACGTTCCTTTTTGAGGTTAAAGAGTTCAGCACAGATTATCCAGAAAGCAGTTAGGAGTTGGCTCTATAGGAGGCATCAGCATGAATGTAGTACAAGTCATGTTCTTTTGATTACAGATATGGTGGCGGCTGCTATTAATGTTCAGAAATTTGTCCGTGCTTGCTTGGAAAAAGTTCATGTGCCGCAGCTCTTCAAGATTGAGTTTAAGGCATCTGTTGTCATTCAATCTTTCTTCCGGGGCTGGCTTGCACGAAAGGATGCTTATGCACGTAGGACTCACTTCACTGAGTTTAAAGCAGCTGTTGTCATTCAGTCTTCCTTACGAGGCTGGTTTGCCCGAAAGGATGCTTGTGCGCGTAGGAATCATATTATCGAAATTCAAAAGCATTGTCGTGGTTGGCTTGTGAAGCGGTACTTCTTGTTCCAAAGAGACCATGTAGTAAAGATTCAGTGTGTCATTCGAAGCTTGAAGTGCCAAAAGGCTCTGAATTGCCAAAAAGATGTTGCTTTGGAGATCCAGCGTTTTATAAGGGGCCATTTAACTCGGAATCAGCTTTTAGGCAGTGCTTTCAAGTTACGCACAGTTACTACTAGTTGCAGCTCAAGACCATTTGGCATTTGTAGTTCTCAATTGCAAATGTTCTTGTTGTCAGTCGTGAAATTACAACGATGGTGGAAGGGTCTCTTGTTGCTTAAGCTAATGAATAAATCGGCCATCATTATTCAGTCATGGACCCGTGGGTGGATAGCCAGGCGAAATGCTAGTGTTTACAGACGCCATGTTGTCATCCAAGAAGATGCCGCGTTGGTGATTCAACGCTACATTAGGGGACATTTAACTCGAAATCGGATATTAGGTGGTGCTTCTAACCTAAGTGCAGTTGTTCCAGCTGGCTGCATTTCTGAACTAGTTGGCTGTCGTAGTTTTCCCCTAGATCTAGTTTTGCTTTCAGCTGTAAAATTGCAACGATGGTGGAAGGGTCTCTTGTTAGAGAAGTTGATGACAAAGTCTGCCATTGTTATTCAGTCTTGTACTCGTGGATGGATAGCCAGGCGAAAGGCCTCTGTTCAAAGACATAATATTATTGTCATTCAATCCCACTGGAAAGGTTACCTTGCACGTAAAGAGTCGAAAGAGCAGTTATTGGATTTACGCTTGAGAATGCAAAAGTCTGCTAGAAATGTGGATGACAGCAAGCGTCTCATAAACAGACTCTTGGCAGCGCTTTCAGAGCTACTCAATATGAAGAGTCTTAGTAACATCCTTCATACTTGTTCAATATTGGGTGAGATTTTCTTTTACATTGCTTAA 3672 0.4254 MDCDEPPSPYPHSSSLLKDISNFTTPRRPPFSLTTARSPTTQFFTASKHSSTFNRRPKKSSTAATSKKLKAFQSELSQSSRKAQIQKERSLRSLAKSLSVWLNFLLQNPDSCGCHFSTADASVPATNGKRDGTPGISVVGVDSTWRTPKRQRKTWSAKENAATGVEVPDSSFSHLSDSLKDICSFDDLKQRMRVYFSLTACKEIFLQMNRVAKTIDEGRLIMKAHCPIVTDVGLKDKAMRILMCYNSIWLRIGIMVVDKLFFSHEGLAKAHAYNKMVEGVYRSGYYENLGNVILKRILLLVLILDKAKCQSYLPLEYGIDGLDGGSPLLFKPESWIKSSSQLIHGYKLSHQQEPLVEYDFRIRDLFVDLQDGLKLCRAIQLLQHNSSILMKIVVPSDTPKKKLSNCGLALQYIRQAGGSLLDEDGITIVADDIANGDKELTLSLLWNMFVHLQVLPLLVDQTSLVGEISKIRGGMGLVNNANSTSMELLLNWIQAVCDNYDCLIDNFHSLVDGKAIWCLLDYYFQKELHNSCSLKEVSMKSGKASIMSVDEYSDALYNFILSQKLTTLLGNFPEVLHISELLQYNGACSDRSVVILLVFLASQLFVKKNLDHLNFRKLLCHDCQSPNHRHLRMLRCLSNSDSIQKHHASDVHGNEDAARKFKAIQAWWQDMAERNGLNKPAVSNLQGSRTTECNINNKRENAARTIQLHFRGLVVRWKFLKMVNAVTLLQTVFRAWLKVRQESVCVILSTVQVCDSSYEILKQSQTYPEILKQSQTYKRYAMLFIHRRSFLRLKSSAQIIQKAVRSWLYRRHQHECSTSHVLLITDMVAAAINVQKFVRACLEKVHVPQLFKIEFKASVVIQSFFRGWLARKDAYARRTHFTEFKAAVVIQSSLRGWFARKDACARRNHIIEIQKHCRGWLVKRYFLFQRDHVVKIQCVIRSLKCQKALNCQKDVALEIQRFIRGHLTRNQLLGSAFKLRTVTTSCSSRPFGICSSQLQMFLLSVVKLQRWWKGLLLLKLMNKSAIIIQSWTRGWIARRNASVYRRHVVIQEDAALVIQRYIRGHLTRNRILGGASNLSAVVPAGCISELVGCRSFPLDLVLLSAVKLQRWWKGLLLEKLMTKSAIVIQSCTRGWIARRKASVQRHNIIVIQSHWKGYLARKESKEQLLDLRLRMQKSARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSILGEIFFYIA 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03200 1223 CDD CH_ASPM_rpt1 345 448 - -
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 1121 1148 IPR000048 GO:0005515
Spst3g03200 1223 Gene3D - 340 454 IPR036872 -
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 906 935 IPR000048 GO:0005515
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 1051 1080 IPR000048 GO:0005515
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 883 912 IPR000048 GO:0005515
Spst3g03200 1223 MobiDBLite consensus disorder prediction 14 65 - -
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 1144 1172 IPR000048 GO:0005515
Spst3g03200 1223 PANTHER UNCHARACTERIZED 42 814 - -
Spst3g03200 1223 SUPERFAMILY Calponin-homology domain, CH-domain 299 527 IPR036872 -
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 1053 1070 IPR000048 GO:0005515
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 1146 1163 IPR000048 GO:0005515
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 885 902 IPR000048 GO:0005515
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 1023 1040 IPR000048 GO:0005515
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 910 926 IPR000048 GO:0005515
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 1122 1140 IPR000048 GO:0005515
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 856 873 IPR000048 GO:0005515
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 956 972 IPR000048 GO:0005515
Spst3g03200 1223 Pfam IQ calmodulin-binding motif 795 812 IPR000048 GO:0005515
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 699 727 IPR000048 GO:0005515
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 952 981 IPR000048 GO:0005515
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 1021 1048 IPR000048 GO:0005515
Spst3g03200 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1104 1167 IPR027417 -
Spst3g03200 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 877 969 IPR027417 -
Spst3g03200 1223 SMART iq_5 792 814 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 1120 1142 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 698 720 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 853 875 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 1020 1042 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 905 927 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 1050 1072 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 721 744 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 951 973 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 1143 1165 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 882 904 IPR000048 GO:0005515
Spst3g03200 1223 SMART iq_5 826 848 IPR000048 GO:0005515
Spst3g03200 1223 MobiDBLite consensus disorder prediction 1 65 - -
Spst3g03200 1223 Pfam Calponin homology (CH) domain 361 452 IPR001715 GO:0005515
Spst3g03200 1223 Gene3D - 480 605 IPR036872 -
Spst3g03200 1223 Gene3D - 1051 1121 - -
Spst3g03200 1223 Gene3D - 1001 1050 - -
Spst3g03200 1223 Gene3D - 696 744 - -
Spst3g03200 1223 Gene3D - 884 931 - -
Spst3g03200 1223 Gene3D - 1122 1168 - -
Spst3g03200 1223 Gene3D - 827 881 - -
Spst3g03200 1223 Gene3D - 932 976 - -
Spst3g03200 1223 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Spst3g03200 1223 ProSiteProfiles Calponin homology (CH) domain profile. 336 453 IPR001715 GO:0005515
Spst3g03200 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1071 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03200 793 942 Myosins gene family AT5G43900 33.333 4.35e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03200 K16743 - gmx:100817636 1533.47