Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03174 ATGCCAGAGTCCAAATTTGCTTTCTGCTTCGCGTTCGATTTTCATTACTCATTTATTGACTTATTGATGATCAACGTTCATGGTCTGTATTTGGGTTCGATTGGTACTGCAATTAACAAGGCTGCTTTGAAAGACCATAATATTTCTCACATTTTGACTGTGGCTGGTCGAATACCACCTGCACATCCTGAGGATTTTGTCTATAAAATTATAGACGGGGTTTCATGGCTTTTAATTGAATTCGCAATTCACAATAAATGGGATAACTCTGTGCGCTTTAGGATGATAATTGTGTTTGCTTGCAATTCTGAACGTGCATGCTTTGGCCCTTAG 333 0.3874 MPESKFAFCFAFDFHYSFIDLLMINVHGLYLGSIGTAINKAALKDHNISHILTVAGRIPPAHPEDFVYKIIDGVSWLLIEFAIHNKWDNSVRFRMIIVFACNSERACFGP 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03174 110 Gene3D Protein tyrosine phosphatase superfamily 23 96 IPR029021 -
Spst3g03174 110 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 16 70 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03174 27 71 Protein tyrosine phosphatase (PTP) family AT3G23610 60.000 2.40e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03174 - - pvu:PHAVU_003G092400g 88.5817