Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03164 ATGAACATGGTGTCGGTATCAGCGTTATGCAAGCCGGTGGCGAGTTTCAACCCGGGACTGACGATGGACACGCTGTCGTTGTTCCGGCACCGGAACAAGGAAAAGGTTGTGGTGATAATGGGGGCAACGGGGACAGGAAAGTCAAAACTTGGCATAGACCTTGCCACGCATTTCCCACCAGCTGAGATAGTCAACTCAGACAAAATGCAAGTGTACCAAGGCCTGGATATCACCACCAACAAAGTCACTGAGGAGGAGTGCAGAGGGGTCCCACACCATCTCCTAGGCACGGTCGAATCTAACTTGGATTTCAGTACCCACGACTTTTGCCACCACGCCACCCTCGCCGTTGGCTCCATTTTGAAACGCGATGGCTTACCCATCATTGCGGGTGGGTCAAACTCTTTCCTCGACGCCTTGGTCAACCACTACCCTGACTTTCGGTTACGCTACCACTGTTTGTTCCTCTGGGTCGACGTCTCGCTCCCGGTGCTTCATTCCTCTCTCGCCGCACGTGTGGACCGCATGATCCGTGCCGGCCAGGTCGACGAGGTTCGACGAATTTTCCACTACCTCGACCACGACTACAGTGTAGGCATTCGAAAGGCCATTGGCGTCCCCGAGTTTCATTCCTTTTTCCAAGCCGAAGCCGACGGAGCCGATGAGAGGACCAAGGAGAAGCTCCTCCAGAGTGCCATTGCCTCCATCAAAATCAACAACTGCAACCTCGCCACCCGACAGCTCCACAAGATTCACCGCCTCCACGGCATTTGGAAACGGAACATGCACCGCCTCGACGCCACCGAGGTTTTCCTCAGGAGCACTTCCCAAGAAGCAGAGCAAGCGTGGGAGGATCACGTTCTATCCAAAAGTCGAAGGATTCTTCACAAGTTCCTCTACGAAGACACCCATGTTGATGTTGGTATTGCTTCTGTTATCGCTTCTTCGCCTCCGCCCATGGCCGCCGCCGCTGCCGCCACTCGCTAG 987 0.5502 MNMVSVSALCKPVASFNPGLTMDTLSLFRHRNKEKVVVIMGATGTGKSKLGIDLATHFPPAEIVNSDKMQVYQGLDITTNKVTEEECRGVPHHLLGTVESNLDFSTHDFCHHATLAVGSILKRDGLPIIAGGSNSFLDALVNHYPDFRLRYHCLFLWVDVSLPVLHSSLAARVDRMIRAGQVDEVRRIFHYLDHDYSVGIRKAIGVPEFHSFFQAEADGADERTKEKLLQSAIASIKINNCNLATRQLHKIHRLHGIWKRNMHRLDATEVFLRSTSQEAEQAWEDHVLSKSRRILHKFLYEDTHVDVGIASVIASSPPPMAAAAAATR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03164 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 262 - -
Spst3g03164 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 196 IPR027417 -
Spst3g03164 328 Gene3D - 33 299 IPR027417 -
Spst3g03164 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 298 IPR039657 -
Spst3g03164 328 Pfam IPP transferase 70 146 - -
Spst3g03164 328 Pfam IPP transferase 150 249 - -
Spst3g03164 328 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03164 Spst-Chr3 81638735 81639721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03164 150 303 C2H2 Transcription Factor Family AT2G27760 28.889 2.29e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03164 K10760 - gmx:100778430 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03164 3 81638735 81639721 Spst6g01130 6 10269436 10270422 PCT