Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03101 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAAGGCATTGCTGAAAAGAAGATGGAAAACAGGGATTTTGTGGGGGCTCGCAAAATTGCTCTAAAGGCTCAGCAGCTTGACCCTGATCTGGAAAATATTGCTCAAATCCTTGTAATTTGTGATGTGCACTGTTGTGCTGAGCAGAAATTGTATGGTAATGAGATGGATTGGTATGGAATTCTTCAGGTTGAACAGACAGCTGGTGATGCACTAATTAAGAAGCAATATAGGAAGTTTGCCCTCCAACTTCATCCGGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCTTTTAAACTGATTGGGGAAGCTCAAAGAGTACTTTTGGACAGAGAAAAACGCGTTCTTTTTGACATGAAGCGGAGAGTTCCAATAAACAAACCTGCTACTTCACATTTTAGTTCTACAGTAAGGAGGAACGTTAGGCCCCCCTTTACAAGCTCAAATGCTCAGCAGCAACAGCAATCTAGGCAGCCAATGCAGCAGCAGCAGCAAAATGGATGCCGCCCTACTTTTTGGACGGTCTGCCCATTTTGTTCTGTTAAGTATCAATATTACAAAGAAATTTTAAATAAATCACTTCGCTGTCAAAATTGTAAAAGGCCCTTTGTTGCATATGAAGTTGGAAAACAAGGTACATCATCAACAGCAACTAATTCAACTCAGCAAGCTTCTGACCAGCAGAAAGGTGGTTTGAATCATGGTGCTTTCAAGGTAGGTACCGGATCTCAAGGAAATTCACATGCTGAGAAGTCCAATACAAGGTCATCTGACAAAAAGGGACCTGCTAGTGTTTCTGGAAAACTTAATGGAAAGAGAAAAAGGAAGCAGGTGGAAGAATCCAGTGAAAGTTCTGATTCTATGAGCAGCAGTGGTGCTGAAGATGATAGAGTTGCTGGCAAGGATGGTTATTCGAGTGTAGAAAACCATTCAACTTCTAGAGTTGGGCATCTACGTAGATCTACCAGGAAAAAACAGCAAGTTTCCTATAAGGAGAATGTGAACAAACATGATGATGGCTTGAAACGAAGTGGTGATGGTGAGAAAGCTAAAATGAATGATCAGAATGGTTTAGCTGCTGAACCCAAAGAAGTAAATCAGAAACAACACTTGTATTCCGAAAGAAATGAGGAAAGTAACACAGTAAAGGGAAAAGATGCTGTGGGAGGGTCAAAGCAGGTGGATGAAACATCAGGGCATTCTCCAGATTCAACTTCCAAAGTATCAAATCAACCAAATGTTTATGTCTTTCCCGATGCAGAGTTCAGTGATTTTGACAAAGACAAGAAGAAAGAATGTTTTGCTGCTGGGCAGATTTGGGCTGTCTATGACACAGCGGAAGGTATGCCTAGATTCTATGCTTTAATTAGGAAAGTTCTCTCTCCTGGATTCAAACTGCAGATAACATGGTTTGAATCTCATCCGGACTGGAAGGATGAAATCAACTGGGTGAATGAGGAATTGCCTGTTGCTTGTGGGAAATATAAACTTGGTGACTCTGACGTCACTGAAGATCATCTGATGTTCTCTCATCTTGTTTTGTGTGAAAAAATTAGTCGTAATACTTTTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCTCTATTTAAAAATTGGGATATTAAATGGTACATGGATGTGAAATCTCATCAGCTGTACGAATATGAGTTTGTTGAAATCTTGACAGATTATGTTGAAGGTCAGGGTGTATATGTTGTGTATTTGACTAAGTTGAAAGGTTTTGTAAGTGTCTTCCTTCAAAATATAAACGAAGCTAATAAATCATTTCAAATTTCATCCCTGGAGTTATTTAGATTCTCTCACAGGGTTCCATCTTTCAAAATGACTGGTGAGGAAAGGGCTGGGGTACCTGCGGGATCGTATGAACTTGATCCTGGAGCTTTGCCAATAAATCTTGCAGAGATTGCTGTTCCTGAAAAGTTGGATGAGAAGGTTGGTCACAGTTCGTCTGGCGGTGACAATACAGGGTCTTCAAATAGATCAGAACCCCTGATGACATCTGAGGGAGGTACGTCCAAACCCAAGGTTAATTTGAAAAACAGCAATTTGGTTAGAGAGAACAAGGAATCTGTTGATGACAGTGATGATTGTTATGCTCCTCCAGCACCGAGATCAGAAACAATAGAAATTCCAGATACTCAATTCTATAATTTTGATGCTGGGAGATCCTTTGAGAAATTTCAGATTGGTCAAATTTGGGCATTTTACAGTGACGAGGATGGATTGCCAAAATATTACGGTCACATTAATAAGATTGTGACAAGCCCAGATCTTGAATTACACGTTTCTTGGCTCACTTGCTACCGGCTACCAGAGAATACCACTAAATGGGAAGACAGAGATATGGGTATGCTTATTTCATGCGGCCGATTTAAAGTTAATAAAACAGATGAATTTCAAAGTATTTATAATACTACCTCATCTGTTTCACATCAAGTGCATGCTGATGCTGTTGGTAAGAATAAGAATTATGCCATCTTCCCGAGGAAAGGGGAAGTTTGGGCGTTATATAGAAAATGGACAAATAAAATGAAATGTTCTGAGTTGAAAGATTGGGAGTATGACATAGTGGAAGTTGTTGAAGTGACCGATTTGTTCATTAAGGTTTTAGTGCTGGAGTTTGTCAATGGGTTTAGTTCCGTTTTCAGGGGCAAATCAAATGAAGGATCATCTGTCAACCTGATAATACCCACAAAAGAGTTGCTTAGATTCTCCCACCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCAATTTAAGAGACTTCTGGGAACTTGATCCAGGTGCGCTACCAATTCATTATTATGGCGTGAGATAA 2871 0.4013 MDCNKEEALRAKGIAEKKMENRDFVGARKIALKAQQLDPDLENIAQILVICDVHCCAEQKLYGNEMDWYGILQVEQTAGDALIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRVLFDMKRRVPINKPATSHFSSTVRRNVRPPFTSSNAQQQQQSRQPMQQQQQNGCRPTFWTVCPFCSVKYQYYKEILNKSLRCQNCKRPFVAYEVGKQGTSSTATNSTQQASDQQKGGLNHGAFKVGTGSQGNSHAEKSNTRSSDKKGPASVSGKLNGKRKRKQVEESSESSDSMSSSGAEDDRVAGKDGYSSVENHSTSRVGHLRRSTRKKQQVSYKENVNKHDDGLKRSGDGEKAKMNDQNGLAAEPKEVNQKQHLYSERNEESNTVKGKDAVGGSKQVDETSGHSPDSTSKVSNQPNVYVFPDAEFSDFDKDKKKECFAAGQIWAVYDTAEGMPRFYALIRKVLSPGFKLQITWFESHPDWKDEINWVNEELPVACGKYKLGDSDVTEDHLMFSHLVLCEKISRNTFKVYPRKGETWALFKNWDIKWYMDVKSHQLYEYEFVEILTDYVEGQGVYVVYLTKLKGFVSVFLQNINEANKSFQISSLELFRFSHRVPSFKMTGEERAGVPAGSYELDPGALPINLAEIAVPEKLDEKVGHSSSGGDNTGSSNRSEPLMTSEGGTSKPKVNLKNSNLVRENKESVDDSDDCYAPPAPRSETIEIPDTQFYNFDAGRSFEKFQIGQIWAFYSDEDGLPKYYGHINKIVTSPDLELHVSWLTCYRLPENTTKWEDRDMGMLISCGRFKVNKTDEFQSIYNTTSSVSHQVHADAVGKNKNYAIFPRKGEVWALYRKWTNKMKCSELKDWEYDIVEVVEVTDLFIKVLVLEFVNGFSSVFRGKSNEGSSVNLIIPTKELLRFSHQIPAFKLTEEHGNLRDFWELDPGALPIHYYGVR 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03101 956 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Spst3g03101 956 MobiDBLite consensus disorder prediction 220 422 - -
Spst3g03101 956 MobiDBLite consensus disorder prediction 138 174 - -
Spst3g03101 956 MobiDBLite consensus disorder prediction 665 701 - -
Spst3g03101 956 Pfam DnaJ domain 67 128 IPR001623 -
Spst3g03101 956 MobiDBLite consensus disorder prediction 220 240 - -
Spst3g03101 956 MobiDBLite consensus disorder prediction 377 392 - -
Spst3g03101 956 MobiDBLite consensus disorder prediction 660 721 - -
Spst3g03101 956 PRINTS DnaJ domain signature 87 102 IPR001623 -
Spst3g03101 956 PRINTS DnaJ domain signature 103 123 IPR001623 -
Spst3g03101 956 PRINTS DnaJ domain signature 69 87 IPR001623 -
Spst3g03101 956 MobiDBLite consensus disorder prediction 404 422 - -
Spst3g03101 956 Pfam Domain of unknown function (DUF3444) 722 933 IPR024593 -
Spst3g03101 956 Pfam Domain of unknown function (DUF3444) 423 629 IPR024593 -
Spst3g03101 956 CDD DnaJ 67 120 IPR001623 -
Spst3g03101 956 MobiDBLite consensus disorder prediction 335 360 - -
Spst3g03101 956 Gene3D DnaJ domain 64 182 IPR036869 -
Spst3g03101 956 SMART dnaj_3 66 123 IPR001623 -
Spst3g03101 956 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Spst3g03101 956 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 949 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03101 Spst-Chr3 80862023 80864893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03101 4 218 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.000 2.49e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03101 - - gmx:100795200 1540.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03101 3 80862023 80864893 Spst6g01074 6 9835926 9840148 PCT