Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03094 ATGGCTGTTGGAGCATTGTTCCACAAAATGACGACAATGGTGACTTCTGATCATGCTTCCGTCGTCTCTATGAACCTTTTTGTTGCACTTCTATGTGCTTGCATCATCATCGGTCATTTGTTGGAGGAGAACCGATGGATCAATGAATCCATCACTGCCCTTCTCATTGTCAGATTCCTAATCTACCTAGGTCTTTGTACTGGGGTCTTTATACTGCTCACGACTGGAGGAAAAAGCTCTCATATACTGGTCTTCAGTGAAGATCTTTTCTTCATTTACCTTCTCCCACCCATCATTTTCAATGCCGGGTTTCAGGTGAAGAAGAAACAATTTTTCCGCAATTTTATGACTATTATGCTCTTTGGTGCAGTTGGTACTTTGATATCATTCTGCATCATATCACTGGGTGCCATACACTTTTTTCAGAAGTTGGACATTGGTTCGCTGAAGATTGGAGATTTTCTAGCAATTGGAGCAATATTTTCAGCAACAGATTCAGTTTGCACCTTGCAGGTTCTTAATCAGGATGAGACTCCTCTACTATATAGCCTGGTCTTTGGGGAGGGGGTGGTAAATGATGCTACCTCTGTAGTACTCTTCAAAGCAATTCAGAATTTTGACCTCTCTCACATTGACTTAACCACTGCCTTACAGTTAATAGGAAATTTTTTATATTTATTCATTGCAAGCACTGTGCTGGGAATCTTTGCTGGATTGCTTAGTGCTTACATTATCAAAAAACTTTATTTTGGCAAGTTAATAAGGCATTCTACAGATCGTGAGGTTGCTCTCATGGTACTCATGGCATACCTTTCATATATGCTAGCTGAACTATTCTCTTTAAGTGCCATTCTGACTGTTTTCTTCTGCGGCATTGTTATGTCTCACTACACGTGGCATAATGTAACTGAAAGTTCAAGAGTGACAACAAAGCATGTTTTCGCCACTTTGTCATTTATTGCTGAAATATTTATCTTCCTCTATGTGGGGATGGATGCACTAGATATAGAAAAGTGGCGAATTGTAAGTCAAAGCCCAAGAAAATCAATTGGGGTCAGTTCGTTGCTGCTGGCACTTATCCTAGTGGGAAGAGCTGCATTTGTTTTCCCTTTGTCTTTCTTATCCAACTTGCTTAAGAAGTCTCAATCTGAGAAAATTGAGTTAAAGCAACAGGTAACAATTTGGTGGGCTGGTCTCATGCGTGGAGCTGTTTCTATTGCACTTGCTTACAATCAGTTTACCAGGCTGGGCCATACTATATTGCGCGAAAATGCCATCATGATCACTAGTACCATTACTGTTGTACTCTTCAGCACATTGGCCTTTGGGTTGATGACGAAGCCACTTGTGAGGCTATTGCTTCCTTCTTCTAAGCAAGTAATGAGCTTGCCGTCCCCACCATCGACACCAAAATCATTCACAGTGCCACTTCTTGGCAGTGGAGGAGAGGATTCATCATGGGCCAATGGTGTCACCCAAAATGGGTCTCCACCAAGCACCTTTAGGATGCTACTAAGCTGCATTCCTACTCGTGGGGTGCACCACTATTGGCGCAAGTTTGATGATTCTGTCATGCGACCCGTGTTTGGTGGACGAGGTTTTGTGCCCTACGTTCCCGGGTCACCCCTTGAACAAAGTGTTCATCAATGGCATGGCAGTTAG 1662 0.4254 MAVGALFHKMTTMVTSDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALLIVRFLIYLGLCTGVFILLTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFCIISLGAIHFFQKLDIGSLKIGDFLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLTTALQLIGNFLYLFIASTVLGIFAGLLSAYIIKKLYFGKLIRHSTDREVALMVLMAYLSYMLAELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHVFATLSFIAEIFIFLYVGMDALDIEKWRIVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLLKKSQSEKIELKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTILRENAIMITSTITVVLFSTLAFGLMTKPLVRLLLPSSKQVMSLPSPPSTPKSFTVPLLGSGGEDSSWANGVTQNGSPPSTFRMLLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVPYVPGSPLEQSVHQWHGS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03094 553 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst3g03094 553 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst3g03094 553 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst3g03094 553 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst3g03094 553 Pfam Sodium/hydrogen exchanger family 59 451 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst3g03094 553 Coils Coil 371 391 - -
Spst3g03094 553 PANTHER SODIUM/HYDROGEN EXCHANGER 15 529 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Spst3g03094 553 Gene3D - 150 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03094 Spst-Chr3 80795865 80799215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03094 4 549 Antiporters AT3G05030 73.224 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03094 - - ccaj:109808409 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03094 3 80795865 80799215 Spst3g03094 3 80795865 80799215 ECH