Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03089 ATGGGGCGTTTGAATTGCAAGAAGATGAGGGGAAATGTTGTTTTGGCAAGAGCATCAAAGAGGAAAGAGGAAGTGGAAGTCGGAAAGGCAGAAGAGAGTGTGGTTCAGAACGGTGGGAATGTGAAGGAGGGTGGAGAAGAAGTAAAGAACAAGCCCTCAAAAGGGGAGAGGAGGCGATCTTCGAAGCCGAATCCGCGGTTGAGCAATCCACCTAACCATGTACATGGTGAGCAAGTAGCTGCAGGGTGGCCCTCTTGGCTCTCCAAGGTTGCAGGGGAAGCTATTAATGGGTTGATACCTAGGAGAGCTGACACTTTTGAAAAGCTGAATAAGTTGATTGCTTTTGTTGTTCTGTTTTCAAATGTTGGACAAGGTACATATAGCAATGTTTACAAAGCAAAGGATACTTTGACAGGGAAAATTGTGGCCCTAAAGAAGGTCCGCTTTGACAATTTAGAGCCCGAGAGTGTAAAATTCATGGCCAGAGAGATCCTTATTTTGCGCCATATGGATCATCCCAACGTTGTCAAACTGGAAGGTTTAGTGACTTCAAGAATGTCGTGCAGTTTGTACCTTGTGTTTGAATACATGGAGCATGACTTGGCTGGACTTGCTACAAGTCCAACAGTAAAGTTCACAGAGTCTCAGCTACTTTCTGGACTGGAACACTGTCACAACCGTCTTGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTGATTGACAATGAAGGAATTCTTAGGATTGCTGATTTTGGATTAGCTTCTTTCTTTGATCCTAATCAAAAGCACCCTATGACCAGCAGGGTGGTTACTTTATGGTATCGGCCTCCAGAGCTTCTCCTTGGAGCCACTGATTACGGTGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCTGGCAAGCCTATTATGCCTGGTCGAACTGAGGTAATCTTTGAATGA 960 0.4542 MGRLNCKKMRGNVVLARASKRKEEVEVGKAEESVVQNGGNVKEGGEEVKNKPSKGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLIPRRADTFEKLNKLIAFVVLFSNVGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRHMDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLATSPTVKFTESQLLSGLEHCHNRLVLHRDIKGSNLLIDNEGILRIADFGLASFFDPNQKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVIFE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03089 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Spst3g03089 319 SUPERFAMILY Protein kinase-like (PK-like) 119 315 IPR011009 -
Spst3g03089 319 FunFam probable serine/threonine-protein kinase At1g54610 93 198 - -
Spst3g03089 319 PANTHER CELL DIVISION PROTEIN KINASE 106 316 - -
Spst3g03089 319 Gene3D Transferase(Phosphotransferase) domain 1 199 319 - -
Spst3g03089 319 MobiDBLite consensus disorder prediction 18 75 - -
Spst3g03089 319 MobiDBLite consensus disorder prediction 44 63 - -
Spst3g03089 319 ProSiteProfiles Protein kinase domain profile. 116 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03089 319 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Spst3g03089 319 SMART serkin_6 116 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03089 319 FunFam Mitogen-activated protein kinase 203 317 - -
Spst3g03089 319 Gene3D Phosphorylase Kinase; domain 1 101 198 - -
Spst3g03089 319 Pfam Protein kinase domain 119 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03089 Spst-Chr3 80758506 80759960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03089 101 315 Core Cell Cycle Gene Families AT5G10270 51.055 2.40e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Spst3g03089 Pkinase 3.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03089 K08819 - gmx:100791757 522.316