Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03080 ATGGGTGGTTGTCTCTGTTGTGAAACAAAGCGATCAGGCAACTTGGGGCAATCTGGGAGCACCCCACTTACCACAGGAACAAAATCAGAGAGTAAATCTGCAAAAGCATTTGCATTCGCAGAGATTGCAAGTGCTACAAAGAATTTTAGGCGACAACTTCTGTTGGGTAGAGTGGGTTATGGGCGAATGTACAAAGGTCAACTGAGTAATGGCCAAGATGTTGTGGTGAAACTGCTTCAGGAAAATAGCATACAAAGAGACCAAGAATTTTTGGATGAGGTTGAGATGCTGTCTTTCTTAAGTCACCCAAATATTGTGAGCATAATTGGTTACTGTTGTGAACGTGATCAGCGGCTACTTGTTTACGAGTATATGCCATTGGGGTCTTTGGATCATCTCTTACACGATCTTCCTCTTGAAAGGGAACCCCTTGACTGGAAGACAAGGATGGAGATAGCAACTGGTATGGCAAAGGCATTGGAGTATTTGCATGATTGGGCAGACCAACCTGTGATATGTGGAAACTTAAAATCATCGAAGGTCCTCTTGGACGAGCATTATAATCCCAAGTTGTCAGGTGTTAGGTTGTTTGGTCCCCTTGGTGATTACGTTCACGGGTTAAGGCGAGGGGTGGGAAAATCTTGTGCGAGTGCCCCAGAATTTATAACCACTGGTTACCTAACTACGAAATGTGATGTGTACAGTTTTGGAGTGGTCCTCCTCGAACTCATTACGGGGCGCAAGGTTGTTGATTATGAAATGCGTCATCTTGTTAAGTGGGCGCGACCTCTTTTTGCGGACCGTAATCAGTTCGATAGATTGGCCGACCCTCTACTTAAGGGGCGTTTTCCAAAGGGAGGGCTATATGAAGCAGTTGCCGTTGCAGCAATGTGTTTGCATGAAGAACCTGATAGAAGGCCCGCGATGAGGGAAGTCGTTACTGCTCTCCAATACCTGGCCTCACGCCCAAATGATTATACCAGACCTCGTCCACCCCCATCATCATCATCATCATCCCCATACCCAACTGCTGTGGATATAACCTGCCGTTGA 1053 0.4615 MGGCLCCETKRSGNLGQSGSTPLTTGTKSESKSAKAFAFAEIASATKNFRRQLLLGRVGYGRMYKGQLSNGQDVVVKLLQENSIQRDQEFLDEVEMLSFLSHPNIVSIIGYCCERDQRLLVYEYMPLGSLDHLLHDLPLEREPLDWKTRMEIATGMAKALEYLHDWADQPVICGNLKSSKVLLDEHYNPKLSGVRLFGPLGDYVHGLRRGVGKSCASAPEFITTGYLTTKCDVYSFGVVLLELITGRKVVDYEMRHLVKWARPLFADRNQFDRLADPLLKGRFPKGGLYEAVAVAAMCLHEEPDRRPAMREVVTALQYLASRPNDYTRPRPPPSSSSSSPYPTAVDITCR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03080 350 PIRSF ILK 15 328 - -
Spst3g03080 350 SUPERFAMILY Protein kinase-like (PK-like) 32 317 IPR011009 -
Spst3g03080 350 Gene3D Transferase(Phosphotransferase) domain 1 125 328 - -
Spst3g03080 350 ProSiteProfiles Protein kinase domain profile. 49 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03080 350 Pfam Protein tyrosine and serine/threonine kinase 55 316 IPR001245 GO:0004672|GO:0006468
Spst3g03080 350 PANTHER OS07G0668900 PROTEIN 28 326 - -
Spst3g03080 350 FunFam receptor-like protein kinase FERONIA 14 124 - -
Spst3g03080 350 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 125 330 - -
Spst3g03080 350 Gene3D Phosphorylase Kinase; domain 1 14 124 - -
Spst3g03080 350 MobiDBLite consensus disorder prediction 323 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03080 Spst-Chr3 80699354 80701139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03080 33 338 Glycoside Hydrolase AT3G07070 51.411 5.93e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst3g03080 PK_Tyr_Ser-Thr 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03080 - - pvu:PHAVU_003G101800g 360.147