Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03048 ATGGATTTTTTAGTGCAGGATAAAATGCTTAGTCCTGAAGGCGAACTTAAAATAAGTTTTGGCTATAAATGCAACAGTGATAGAGGTATTCCTTGTGAAGTTGCCAATGGCTGCAAAATCCTTCCTGGAGTACGCAGAACAAGTAGTTTCTCTTGCTTGTCGGGTGCAGCCTTAAGTGCGAATGCTACATTAGCCAATACAAACATCTGCAATGGTAAAATAGGTGAAGAAATCCTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAGGTAACCTCTTCGCCAAGTCTTTCAAAGTTGGACATACTATCATCTTCCCTCCCGAGTAGTTTGTCTTACCTTAGCTGCAGTCCTTCTACTACAAGTGACATCCTTGAATATGACCCTTGCACATTAAAATCCATGAGCGATCCTTCCAGAACTGAAGGTTTTATTAATGTTAAGGAAATTCAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTTAATGGAAGAGATGCAGCCGACTTTCTGGCTGGTACCCTGTATGACACCATCATATCATACTTTAATAAGTTAATCGAGGAATTGGAACCAGGTTCCATCGGAGCTTATAATGATGGGGGGTTGGGTGAATCCCTGCAATATAAGTCGAATGACAGACTTATGTATCACGAGGATCAATCTATGGCAAGATGTAAAGGAATAAATGATACTAATCATGGGTGTTATGCAAAGAGTTGTTTATCTGCTAAGTCAGAAGTATCACGTGATCCATTTTCACAAGGGGTACTTGATATCCTTGAACTAGCTATTAGTCAGGCTGAGAATGATTTCCTTTACATGGTTGAGCAAGAAATGGAGGAACGTCCTGATTTAGTTTCTATTGGATCTTGTGTTTTACTAGTGCTTCTTCATGGTAATGATTTGTATACGCTTAATCTAGGTGACAGCAGAGCAGTGTTGGCGACTTGCAGTACAGGTTACCGAATGGATAAGAGCGAGAGACTCAAGGCTATACAGCTTACAGATAATCACACTGTTGATAATGAAGTTGAAAGAGCTAGACTTCTGGCCGATCATCCCGATGATCCCAGGATAGTTATAGCAGGAAAAGTGAAAGGGAAACTCAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGGTTGGTATTCTCTCTTATCACCAAATAAAAAATCTGAATGATGCTTTGATGGGAATCCTTCGTGTTCGTGATCTTAAAAGCCCACCATACATATCCACTCAACCATCACTGAATGTCCATAGAATCTCAAATTCCGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTACAGTCGTATATCTTGAGCACACCTTTTGGTGATCCAGCAAAGTTTCTTATAGAGCAGCTTGTGGCTAGAGCATCTGTTTCTGCCGGTTTAAGCACTGAAGAGTTGATGAATATTCCAGCTGGGAGGAGAAGGAAGTACCATGACGATGTGACTGTAATTGTGATCATGCTTGGGATGAATCAACGGACTTCAAAGGCATCAACTTGCATTTGA 1626 0.4084 MDFLVQDKMLSPEGELKISFGYKCNSDRGIPCEVANGCKILPGVRRTSSFSCLSGAALSANATLANTNICNGKIGEEILPSWDSPNSFRKVTSSPSLSKLDILSSSLPSSLSYLSCSPSTTSDILEYDPCTLKSMSDPSRTEGFINVKEIQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNKLIEELEPGSIGAYNDGGLGESLQYKSNDRLMYHEDQSMARCKGINDTNHGCYAKSCLSAKSEVSRDPFSQGVLDILELAISQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCSTGYRMDKSERLKAIQLTDNHTVDNEVERARLLADHPDDPRIVIAGKVKGKLKVTRAFGVGYLKKVGILSYHQIKNLNDALMGILRVRDLKSPPYISTQPSLNVHRISNSDQFVIVGSDGLFDFFSNDEAVKLVQSYILSTPFGDPAKFLIEQLVARASVSAGLSTEELMNIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03048 541 CDD PP2Cc 157 526 IPR001932 -
Spst3g03048 541 ProSiteProfiles PPM-type phosphatase domain profile. 144 528 IPR001932 -
Spst3g03048 541 SMART PP2C_4 135 526 IPR001932 -
Spst3g03048 541 SUPERFAMILY PP2C-like 158 529 IPR036457 -
Spst3g03048 541 PANTHER PROTEIN PHOSPHATASE 2C 152 526 IPR015655 GO:0004722|GO:0006470
Spst3g03048 541 Gene3D - 115 537 IPR036457 -
Spst3g03048 541 Pfam Protein phosphatase 2C 288 483 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03048 Spst-Chr3 80221274 80223159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03048 12 541 PP2C-type Phosphatase Gene Family AT3G16560 60.261 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03048 - - vun:114178627 920.998